RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 EIF5BO60841 1220 aaKnown RBP15.4■□□□□ 0.06
PRKN-210ENST00000612540 IGSF3O75054 1194 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 CAPN15O75808 1086 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 REC8O95072 547 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 RBM5P52756 815 aaKnown RBP eCLIP15.4■□□□□ 0.06
PRKN-210ENST00000612540 ADGRA1Q86SQ6 560 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 ZNF589Q86UQ0 364 aaPredicted RBP15.4■□□□□ 0.06
PRKN-210ENST00000612540 AGBL3Q8NEM8 1001 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 TEKT1Q969V4 418 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 BACH2Q9BYV9 841 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 PUS7LQ9H0K6 701 aaKnown RBP15.4■□□□□ 0.06
PRKN-210ENST00000612540 IL25Q9H293 177 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 HDAC9Q9UKV0 1011 aa15.4■□□□□ 0.06
PRKN-210ENST00000612540 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.05
PRKN-210ENST00000612540 EPHX2P34913 555 aa15.39■□□□□ 0.05
PRKN-210ENST00000612540 GMPSP49915 693 aaPredicted RBP15.39■□□□□ 0.05
PRKN-210ENST00000612540 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
PRKN-210ENST00000612540 TMED8Q6PL24 325 aaPredicted RBP15.39■□□□□ 0.05
PRKN-210ENST00000612540 TNS4Q8IZW8 715 aa15.39■□□□□ 0.05
PRKN-210ENST00000612540 GPC2Q8N158 579 aa15.39■□□□□ 0.05
PRKN-210ENST00000612540 OGFOD1Q8N543 542 aa15.39■□□□□ 0.05
PRKN-210ENST00000612540 ARMT1Q9H993 441 aa15.39■□□□□ 0.05
PRKN-210ENST00000612540 AATFQ9NY61 560 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRKN-210ENST00000612540 MKRN1Q9UHC7 482 aaKnown RBP15.39■□□□□ 0.05
PRKN-210ENST00000612540 BAG3O95817 575 aa15.38■□□□□ 0.05
PRKN-210ENST00000612540 USP17L8P0C7I0 530 aa15.38■□□□□ 0.05
PRKN-210ENST00000612540 RPS12P25398 132 aaKnown RBP15.38■□□□□ 0.05
PRKN-210ENST00000612540 BTDP43251 543 aa15.38■□□□□ 0.05
PRKN-210ENST00000612540 CRKP46108 304 aa15.38■□□□□ 0.05
PRKN-210ENST00000612540 EAPPQ56P03 285 aaPredicted RBP15.38■□□□□ 0.05
PRKN-210ENST00000612540 LCORLQ8N3X6 602 aa15.38■□□□□ 0.05
PRKN-210ENST00000612540 UPF2Q9HAU5 1272 aaKnown RBP15.38■□□□□ 0.05
PRKN-210ENST00000612540 DAGLAQ9Y4D2 1042 aa15.38■□□□□ 0.05
PRKN-210ENST00000612540 CNTNAP1P78357 1384 aa15.37■□□□□ 0.05
PRKN-210ENST00000612540 SEC24BO95487 1268 aa15.37■□□□□ 0.05
PRKN-210ENST00000612540 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
PRKN-210ENST00000612540 GMLQ99445 158 aa15.37■□□□□ 0.05
PRKN-210ENST00000612540 ECM29Q5VYK3 1845 aa15.37■□□□□ 0.05
PRKN-210ENST00000612540 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
PRKN-210ENST00000612540 GAKO14976 1311 aa15.37■□□□□ 0.05
PRKN-210ENST00000612540 APPP05067 770 aa15.36■□□□□ 0.05
PRKN-210ENST00000612540 HDLBPQ00341 1268 aaKnown RBP15.36■□□□□ 0.05
PRKN-210ENST00000612540 CFAP100Q494V2 611 aa15.36■□□□□ 0.05
PRKN-210ENST00000612540 HHIPL2Q6UWX4 724 aa15.36■□□□□ 0.05
PRKN-210ENST00000612540 CRNKL1Q9BZJ0 848 aaKnown RBP15.36■□□□□ 0.05
PRKN-210ENST00000612540 SERPINA10Q9UK55 444 aa15.36■□□□□ 0.05
PRKN-210ENST00000612540 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
PRKN-210ENST00000612540 BAZ2AQ9UIF9 1905 aaKnown RBP15.36■□□□□ 0.05
PRKN-210ENST00000612540 NAV1Q8NEY1 1877 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 GPR75-ASB3A0A0A6YYF3 556 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 TMEM88BA6NKF7 163 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 PLCG2P16885 1265 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 MICALL2Q8IY33 904 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 TEX11Q8IYF3 940 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 SH3RF3Q8TEJ3 882 aaPredicted RBP15.35■□□□□ 0.05
PRKN-210ENST00000612540 STRBPQ96SI9 672 aaKnown RBP15.35■□□□□ 0.05
PRKN-210ENST00000612540 RIOK1Q9BRS2 568 aaKnown RBP15.35■□□□□ 0.05
PRKN-210ENST00000612540 SLC4A4Q9Y6R1 1079 aa15.35■□□□□ 0.05
PRKN-210ENST00000612540 PRKAB2O43741 272 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 GNAT2P19087 354 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 LMOD1P29536 600 aaPredicted RBP15.34■□□□□ 0.05
PRKN-210ENST00000612540 PTH1RQ03431 593 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
PRKN-210ENST00000612540 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 CERS3Q8IU89 383 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 DPF2Q92785 391 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 FAM163AQ96GL9 167 aaPredicted RBP15.34■□□□□ 0.05
PRKN-210ENST00000612540 ZDHHC15Q96MV8 337 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
PRKN-210ENST00000612540 CNOT7Q9UIV1 285 aaKnown RBP15.34■□□□□ 0.05
PRKN-210ENST00000612540 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
PRKN-210ENST00000612540 H7C1D1 291 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 HSPD1P10809 573 aaKnown RBP15.33■□□□□ 0.04
PRKN-210ENST00000612540 MCCP23508 829 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 USP5P45974 858 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 TDO2P48775 406 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 PPP4CP60510 307 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 MAP1SQ66K74 1059 aaPredicted RBP15.33■□□□□ 0.04
PRKN-210ENST00000612540 SDR42E1Q8WUS8 393 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 MRIQ9BWK5 157 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 NACAP1Q9BZK3 213 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 MYOZ2Q9NPC6 264 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 USP40Q9NVE5 1235 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 FOCADQ5VW36 1801 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 MYH1P12882 1939 aa15.33■□□□□ 0.04
PRKN-210ENST00000612540 TBC1D10BQ4KMP7 808 aaPredicted RBP15.32■□□□□ 0.04
PRKN-210ENST00000612540 APOBEC3HQ6NTF7 200 aaKnown RBP15.32■□□□□ 0.04
PRKN-210ENST00000612540 DSCC1Q9BVC3 393 aa15.32■□□□□ 0.04
PRKN-210ENST00000612540 GPRC5DQ9NZD1 345 aa15.32■□□□□ 0.04
PRKN-210ENST00000612540 TMOD2Q9NZR1 351 aa15.32■□□□□ 0.04
PRKN-210ENST00000612540 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
PRKN-210ENST00000612540 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
PRKN-210ENST00000612540 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 EPS15P42566 896 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 VEGFBP49765 207 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 MMP14P50281 582 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms