RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 RPS12P25398 132 aaKnown RBP12.15□□□□□ -0.46
PVT1-221ENST00000612011 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
PVT1-221ENST00000612011 HDLBPQ00341 1268 aaKnown RBP12.15□□□□□ -0.46
PVT1-221ENST00000612011 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
PVT1-221ENST00000612011 FAM163AQ96GL9 167 aaPredicted RBP12.15□□□□□ -0.46
PVT1-221ENST00000612011 DSCC1Q9BVC3 393 aa12.15□□□□□ -0.46
PVT1-221ENST00000612011 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
PVT1-221ENST00000612011 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 EPB41L2O43491 1005 aaKnown RBP12.14□□□□□ -0.47
PVT1-221ENST00000612011 USP17L8P0C7I0 530 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 PLCG2P16885 1265 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 MCCP23508 829 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 GMPSP49915 693 aaPredicted RBP12.14□□□□□ -0.47
PVT1-221ENST00000612011 CFAP100Q494V2 611 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 GPC2Q8N158 579 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
PVT1-221ENST00000612011 CRNKL1Q9BZJ0 848 aaKnown RBP12.14□□□□□ -0.47
PVT1-221ENST00000612011 SERPINA10Q9UK55 444 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
PVT1-221ENST00000612011 SLC4A4Q9Y6R1 1079 aa12.14□□□□□ -0.47
PVT1-221ENST00000612011 RPAP1Q9BWH6 1393 aaPredicted RBP12.14□□□□□ -0.47
PVT1-221ENST00000612011 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
PVT1-221ENST00000612011 PRKAB2O43741 272 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 APPP05067 770 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 PPP4CP60510 307 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 MAP4K1Q92918 833 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 ZDHHC15Q96MV8 337 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 C22orf23Q9BZE7 217 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
PVT1-221ENST00000612011 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
PVT1-221ENST00000612011 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 GSG1L2A8MUP6 293 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
PVT1-221ENST00000612011 FOXP2O15409 715 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 USP5P45974 858 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 MMP14P50281 582 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 DLGAP5Q15398 846 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 DPF2Q92785 391 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 TBC1D32Q96NH3 1257 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 NAPBQ9H115 298 aa12.12□□□□□ -0.47
PVT1-221ENST00000612011 EPB41L4AQ9HCS5 686 aaPredicted RBP12.12□□□□□ -0.47
PVT1-221ENST00000612011 ZMYM6O95789 1325 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 GOLGB1Q14789 3259 aaKnown RBP12.11□□□□□ -0.47
PVT1-221ENST00000612011 DDNO94850 711 aaPredicted RBP12.11□□□□□ -0.47
PVT1-221ENST00000612011 HSPA4P34932 840 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 TDO2P48775 406 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 RHBDL3P58872 404 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
PVT1-221ENST00000612011 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 IFNL3Q8IZI9 196 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 TGFBRAP1Q8WUH2 860 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 DDRGK1Q96HY6 314 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 MYOZ2Q9NPC6 264 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
PVT1-221ENST00000612011 CNOT7Q9UIV1 285 aaKnown RBP12.11□□□□□ -0.47
PVT1-221ENST00000612011 MYH6P13533 1939 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 GREB1LQ9C091 1923 aaPredicted RBP12.1□□□□□ -0.47
PVT1-221ENST00000612011 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 H7C1D1 291 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 LMOD1P29536 600 aaPredicted RBP12.1□□□□□ -0.47
PVT1-221ENST00000612011 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
PVT1-221ENST00000612011 ZNF280AP59817 542 aaPredicted RBP12.1□□□□□ -0.47
PVT1-221ENST00000612011 ALX1Q15699 326 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 CREB3L3Q68CJ9 461 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 MAPKAPK5Q8IW41 473 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 TDRD3Q9H7E2 651 aaKnown RBP12.1□□□□□ -0.47
PVT1-221ENST00000612011 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 GPRC5DQ9NZD1 345 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 TMOD2Q9NZR1 351 aa12.1□□□□□ -0.47
PVT1-221ENST00000612011 DOCK1Q14185 1865 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 TRPM7Q96QT4 1865 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 SLC27A2O14975 620 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 FGAP02671 866 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 PICALMQ13492 652 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 IMMTQ16891 758 aaKnown RBP12.09□□□□□ -0.47
PVT1-221ENST00000612011 KIF4BQ2VIQ3 1234 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 RBM26Q5T8P6 1007 aaKnown RBP12.09□□□□□ -0.47
PVT1-221ENST00000612011 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 PRMT6Q96LA8 375 aaPredicted RBP12.09□□□□□ -0.47
PVT1-221ENST00000612011 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
PVT1-221ENST00000612011 FLT1P17948 1338 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 OTOFQ9HC10 1997 aa12.09□□□□□ -0.47
PVT1-221ENST00000612011 GLTPD2A6NH11 291 aa12.08□□□□□ -0.48
PVT1-221ENST00000612011 MYO1BO43795 1136 aa12.08□□□□□ -0.48
PVT1-221ENST00000612011 WDHD1O75717 1129 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms