RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 RHOXF2BP0C7M4 288 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 ADCK5Q3MIX3 580 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 KRT40Q6A162 431 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 OTUD7BQ6GQQ9 843 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 ANKRD18AQ8IVF6 992 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 ZSCAN29Q8IWY8 852 aaPredicted RBP12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 TSC1Q92574 1164 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 USP28Q96RU2 1077 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 RHOXF2Q9BQY4 288 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 TSGA10Q9BZW7 698 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 SYNRGQ9UMZ2 1314 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 TMCO5BA8MYB1 307 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 UBA5Q9GZZ9 404 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 TAOK3Q9H2K8 898 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 DTNBO60941 627 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 PPP1R2P41236 205 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 KIAA1524Q8TCG1 905 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
CDC42EP3-206ENST00000611976 MBD4O95243 580 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 IL2RBP14784 551 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 HAUS7Q99871 368 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 BCCIPQ9P287 314 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 CETN2P41208 172 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 DIS3L2Q8IYB7 885 aaKnown RBP12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 USP6P35125 1406 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 MAP2K1Q02750 393 aaPredicted RBP12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 ADGRB3O60242 1522 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 POSTNQ15063 836 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 PDLIM2Q96JY6 352 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 NFE2L3Q9Y4A8 694 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 ARHGAP31Q2M1Z3 1444 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 YEATS2Q9ULM3 1422 aa12.35□□□□□ -0.43
CDC42EP3-206ENST00000611976 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 SPECC1Q5M775 1068 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 HEATR3Q7Z4Q2 680 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 A0A1W2PQ27 194 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 A0A1W2PQ64 194 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 A0A1W2PQD8 194 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 METP08581 1390 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 PFKFB1P16118 471 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 GBP2P32456 591 aaPredicted RBP12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 STX8Q9UNK0 236 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 NSFL1CQ9UNZ2 370 aaKnown RBP12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 CTNND2Q9UQB3 1225 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 TAF5LO75529 589 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 MCM7P33993 719 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 POLA2Q14181 598 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 TNIP1Q15025 636 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 CCDC122Q5T0U0 273 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 SPECC1LQ69YQ0 1117 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 CUL5Q93034 780 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 CCDC113Q9H0I3 377 aa12.34□□□□□ -0.43
CDC42EP3-206ENST00000611976 CMA1P23946 247 aa12.33□□□□□ -0.43
CDC42EP3-206ENST00000611976 CETN1Q12798 172 aa12.33□□□□□ -0.43
CDC42EP3-206ENST00000611976 STXBP4Q6ZWJ1 553 aa12.33□□□□□ -0.43
CDC42EP3-206ENST00000611976 SELENOOQ9BVL4 669 aa12.33□□□□□ -0.43
CDC42EP3-206ENST00000611976 C6orf50Q9HD87 102 aa12.33□□□□□ -0.43
CDC42EP3-206ENST00000611976 CEP152O94986 1710 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 VWA3AA6NCI4 1184 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 TCERG1LQ5VWI1 586 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 GPR161Q8N6U8 529 aaKnown RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 EDC3Q96F86 508 aaKnown RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 CAPZA3Q96KX2 299 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZNF215Q9UL58 517 aaPredicted RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 DRC1Q96MC2 740 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 COPRSQ9NQ92 184 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 IQSEC2Q5JU85 1478 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 EBAG9O00559 213 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 CCDC172P0C7W6 258 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 SPAG5Q96R06 1193 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 RASSF4Q9H2L5 321 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 C19orf44Q9H6X5 657 aa12.33□□□□□ -0.44
CDC42EP3-206ENST00000611976 NAPAP54920 295 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 MIGA1Q8NAN2 632 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms