RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 PPP2R5BQ15173 497 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 NKX1-1Q15270 411 aaPredicted RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 BTBD18B2RXH4 712 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 SNAP23O00161 211 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 PFKFB1P16118 471 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 ADD2P35612 726 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 BCAMP50895 628 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 RASGRF1Q13972 1273 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 IFIT1BQ5T764 474 aaKnown RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 M0R2C6 588 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 PIH1D3Q9NQM4 214 aaKnown RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 SEC31BQ9NQW1 1179 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 TSPOAP1O95153 1857 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 EXOSC10Q01780 885 aaKnown RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 ZMYND15Q9H091 742 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 V9GY48 417 aaPredicted RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 CDHR2Q9BYE9 1310 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 CALM1P0DP23 149 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 CALM2P0DP24 149 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 CALM3P0DP25 149 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 RPS8P62241 208 aaKnown RBP7.31□□□□□ -1.24
SNX13-213ENST00000611725 SNW1Q13573 536 aaKnown RBP7.31□□□□□ -1.24
SNX13-213ENST00000611725 ARHGAP29Q52LW3 1261 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 MB21D2Q8IYB1 491 aaPredicted RBP7.31□□□□□ -1.24
SNX13-213ENST00000611725 STRBPQ96SI9 672 aaKnown RBP7.31□□□□□ -1.24
SNX13-213ENST00000611725 CARMIL3Q8ND23 1372 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 BAG3O95817 575 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 UBA7P41226 1012 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 LIFRP42702 1097 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 SPTY2D1Q68D10 685 aaPredicted RBP7.31□□□□□ -1.24
SNX13-213ENST00000611725 FANCBQ8NB91 859 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 MYRIPQ8NFW9 859 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 MCM9Q9NXL9 1143 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 DENND2AQ9ULE3 1009 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 STIM1Q13586 685 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 NOSTRINQ8IVI9 506 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 ZNF444Q8N0Y2 327 aaPredicted RBP7.31□□□□□ -1.24
SNX13-213ENST00000611725 TSC1Q92574 1164 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 GJB4Q9NTQ9 266 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 PYCARDQ9ULZ3 195 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 KCNJ14Q9UNX9 436 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 ZNF609O15014 1411 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 URI1O94763 535 aaPredicted RBP7.31□□□□□ -1.24
SNX13-213ENST00000611725 IFNAR1P17181 557 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 CASP7P55210 303 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 CEP135Q66GS9 1140 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 CUTAO60888 179 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 OVOS2A0A0G2JMS6 1433 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 SIGLEC1Q9BZZ2 1709 aa7.31□□□□□ -1.24
SNX13-213ENST00000611725 A0A087WWV3 80 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 KDM6AO15550 1401 aaPredicted RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 CRKLP46109 303 aaKnown RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 GYG1P46976 350 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 ST3GAL1Q11201 340 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 KAT14Q9H8E8 782 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 TNKSO95271 1327 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 RICTORQ6R327 1708 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 TOM1O60784 492 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 CSF1RP07333 972 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 C11orf57Q6ZUT1 292 aaPredicted RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 ZNF654Q8IZM8 581 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 CABP5Q9NP86 173 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 CPDO75976 1380 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 CYP19A1P11511 503 aaPredicted RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 AFMP43652 599 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 SPAG1Q07617 926 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 CPLX3Q8WVH0 158 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 DHX58Q96C10 678 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 AIFM3Q96NN9 605 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 NFE2L3Q9Y4A8 694 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 RTL9Q8NET4 1388 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 TUBB4AP04350 444 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 NDUFA8P51970 172 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 UBE4AQ14139 1066 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 RIPOR2Q9Y4F9 1068 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 USP17L12C9JPN9 530 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 USP17L21D6R901 530 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 TULP1O00294 542 aaPredicted RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 HIBADHP31937 336 aaKnown RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 GNAQP50148 359 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 CHRNDQ07001 517 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 PPARAQ07869 468 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 MEX3CQ5U5Q3 659 aaKnown RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 CACTINQ8WUQ7 758 aaKnown RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 PLA2G12BQ9BX93 195 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 XPO4Q9C0E2 1151 aaKnown RBP7.3□□□□□ -1.24
SNX13-213ENST00000611725 ANKRD2Q9GZV1 360 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 PCDHA5Q9Y5H7 936 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 PRKAB2O43741 272 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 DNAI1Q9UI46 699 aa7.3□□□□□ -1.24
SNX13-213ENST00000611725 N4BP3O15049 544 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 GNPATO15228 680 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 FANCCQ00597 558 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 DPCR1Q3MIW9 517 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 IQUBQ8NA54 791 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 CLIC4Q9Y696 253 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 ZMYM6O95789 1325 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 SOS2Q07890 1332 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms