RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NAP1L1P55209 391 aaKnown RBP9.94□□□□□ -0.82
LIG4-204ENST00000611712 STX17P56962 302 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 KIF4BQ2VIQ3 1234 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 SOGA3Q5TF21 947 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 MED23Q9ULK4 1368 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 CCDC194A0A1B0GVG4 234 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 A0A1W2PQ27 194 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 A0A1W2PQ64 194 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 A0A1W2PQD8 194 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 CUTAO60888 179 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 IGSF3O75054 1194 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 CMA1P23946 247 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 RILPL1Q5EBL4 403 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 GIGYF2Q6Y7W6 1299 aaKnown RBP9.94□□□□□ -0.82
LIG4-204ENST00000611712 LINC00301Q8NCQ3 95 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 GJB4Q9NTQ9 266 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 POLR2DO15514 142 aaKnown RBP9.94□□□□□ -0.82
LIG4-204ENST00000611712 PDE8BO95263 885 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 FOXO4P98177 505 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 DPCR1Q3MIW9 517 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 USPL1Q5W0Q7 1092 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 ZSWIM4Q9H7M6 989 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 IMPACTQ9P2X3 320 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 MAP3K15Q6ZN16 1313 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 CCDC66A2RUB6 948 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 GOLGA6L9A6NEM1 432 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 ERICH4A6NGS2 130 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 PNOCQ13519 176 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 DDB1Q16531 1140 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 AKNAD1Q5T1N1 836 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 NUP88Q99567 741 aaPredicted RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 ZNF609O15014 1411 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 PATL2C9JE40 543 aaKnown RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 ZPR1O75312 459 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 PRDM1O75626 825 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 EIF5P55010 431 aaKnown RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 PDE4BQ07343 736 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 ATG9AQ7Z3C6 839 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 CCDC12Q8WUD4 166 aaPredicted RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 KCNB2Q92953 911 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 CARD10Q9BWT7 1032 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 ANKIB1Q9P2G1 1089 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 ZMYM6O95789 1325 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 N4BP3O15049 544 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 DEXIO95424 95 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 RFX5P48382 616 aaPredicted RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 ZNF444Q8N0Y2 327 aaPredicted RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 KRT222Q8N1A0 295 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 CLIC6Q96NY7 704 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 ACBD3Q9H3P7 528 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 BMP15O95972 392 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 KIF5BP33176 963 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 TNNT3P45378 269 aaPredicted RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 APOA5Q6Q788 366 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 IFNL3Q8IZI9 196 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 ZNF397Q8NF99 534 aaPredicted RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 AIFM3Q96NN9 605 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 CRNKL1Q9BZJ0 848 aaKnown RBP9.93□□□□□ -0.82
LIG4-204ENST00000611712 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
LIG4-204ENST00000611712 MROH5Q6ZUA9 1318 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 ATP2B2Q01814 1243 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 BMS1Q14692 1282 aaKnown RBP9.92□□□□□ -0.82
LIG4-204ENST00000611712 UBE3CQ15386 1083 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 SYNE4Q8N205 404 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 SMARCC2Q8TAQ2 1214 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 ERO1AQ96HE7 468 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 KAT14Q9H8E8 782 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
LIG4-204ENST00000611712 BTBD18B2RXH4 712 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 KIF23Q02241 960 aaPredicted RBP9.92□□□□□ -0.82
LIG4-204ENST00000611712 RRAGBQ5VZM2 374 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 FEZ1Q99689 392 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 ZBTB1Q9Y2K1 713 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 POLR3GO15318 223 aaPredicted RBP9.92□□□□□ -0.82
LIG4-204ENST00000611712 ERLIN1O75477 346 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 TUBB4AP04350 444 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 ADD2P35612 726 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 KRT2P35908 639 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 UBA7P41226 1012 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 RBM6P78332 1123 aaKnown RBP9.92□□□□□ -0.82
LIG4-204ENST00000611712 ARID5BQ14865 1188 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 SLC39A14Q15043 492 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 GOLPH3LQ9H4A5 285 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 NFE2L3Q9Y4A8 694 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
LIG4-204ENST00000611712 SPATA31A3Q5VYP0 1347 aa9.92□□□□□ -0.82
LIG4-204ENST00000611712 RFX7Q2KHR2 1363 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 RTL9Q8NET4 1388 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 hCG_1642624A0A1W2PR95 340 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 WWC3Q9ULE0 1092 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 ZNF174Q15697 407 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 ELF2Q15723 593 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 NLRP10Q86W26 655 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 BAG1Q99933 345 aaPredicted RBP9.91□□□□□ -0.82
LIG4-204ENST00000611712 STX8Q9UNK0 236 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 CDC25BP30305 580 aa9.91□□□□□ -0.82
LIG4-204ENST00000611712 BCAMP50895 628 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms