RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 DIXDC1Q155Q3 683 aa26.91■■□□□ 1.9
CBWD3-207ENST00000611426 CNKSR2Q8WXI2 1034 aa26.91■■□□□ 1.9
CBWD3-207ENST00000611426 DAGLAQ9Y4D2 1042 aa26.91■■□□□ 1.9
CBWD3-207ENST00000611426 MTX1Q13505 466 aa26.9■■□□□ 1.9
CBWD3-207ENST00000611426 CCDC102BQ68D86 513 aa26.9■■□□□ 1.9
CBWD3-207ENST00000611426 TNNQ9UQP3 1299 aa26.9■■□□□ 1.9
CBWD3-207ENST00000611426 SALL1Q9NSC2 1324 aa26.89■■□□□ 1.9
CBWD3-207ENST00000611426 FBXO46Q6PJ61 603 aaPredicted RBP26.89■■□□□ 1.9
CBWD3-207ENST00000611426 CLUAP1Q96AJ1 413 aa26.89■■□□□ 1.9
CBWD3-207ENST00000611426 MS4A4AQ96JQ5 239 aa26.89■■□□□ 1.9
CBWD3-207ENST00000611426 AKAP2Q9Y2D5 859 aa26.89■■□□□ 1.9
CBWD3-207ENST00000611426 GNAI2P04899 355 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 GTF2A2P52657 109 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 TFCP2Q12800 502 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 CRHR2Q13324 411 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 DCAF15Q66K64 600 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 CDC42EP5Q6NZY7 148 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 FAM151AQ8WW52 585 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 OTUD5Q96G74 571 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 WRNIP1Q96S55 665 aa26.88■■□□□ 1.89
CBWD3-207ENST00000611426 ZGPATQ8N5A5 531 aaKnown RBP26.87■■□□□ 1.89
CBWD3-207ENST00000611426 A0A1B0GUL7 405 aa26.86■■□□□ 1.89
CBWD3-207ENST00000611426 TCP10Q12799 353 aa26.86■■□□□ 1.89
CBWD3-207ENST00000611426 ZKSCAN4Q969J2 545 aaPredicted RBP26.86■■□□□ 1.89
CBWD3-207ENST00000611426 USP40Q9NVE5 1235 aa26.86■■□□□ 1.89
CBWD3-207ENST00000611426 RPAP1Q9BWH6 1393 aaPredicted RBP26.86■■□□□ 1.89
CBWD3-207ENST00000611426 CCL15-CCL14A0A0B4J2E2 113 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 SPDYE5A6NIY4 337 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 ZBTB22O15209 634 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 CCL15Q16663 113 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 MIGA2Q7L4E1 593 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 BRI3BPQ8WY22 251 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 XAGE2Q96GT9 111 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 TRIM17Q9Y577 477 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 SNCAIPQ9Y6H5 919 aa26.85■■□□□ 1.89
CBWD3-207ENST00000611426 RASGRF1Q13972 1273 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 ZKSCAN2Q63HK3 967 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 ERO1BQ86YB8 467 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.84■■□□□ 1.89
CBWD3-207ENST00000611426 ERO1AQ96HE7 468 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 NEUROD6Q96NK8 337 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 ZNF341Q9BYN7 854 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 NFIAQ12857 509 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 MVPQ14764 893 aaKnown RBP26.84■■□□□ 1.89
CBWD3-207ENST00000611426 ABCF2Q9UG63 623 aa26.84■■□□□ 1.89
CBWD3-207ENST00000611426 AK9Q5TCS8 1911 aa26.83■■□□□ 1.89
CBWD3-207ENST00000611426 TMEM57Q8N5G2 664 aa26.83■■□□□ 1.88
CBWD3-207ENST00000611426 SP3Q02447 781 aa26.82■■□□□ 1.88
CBWD3-207ENST00000611426 G3BP1Q13283 466 aaKnown RBP eCLIP26.82■■□□□ 1.88
CBWD3-207ENST00000611426 OTOP1Q7RTM1 612 aa26.82■■□□□ 1.88
CBWD3-207ENST00000611426 DZIP1Q86YF9 867 aaKnown RBP26.82■■□□□ 1.88
CBWD3-207ENST00000611426 CD99L2Q8TCZ2 262 aa26.82■■□□□ 1.88
CBWD3-207ENST00000611426 FAM198AQ9UFP1 575 aa26.82■■□□□ 1.88
CBWD3-207ENST00000611426 PDS5AQ29RF7 1337 aaKnown RBP26.81■■□□□ 1.88
CBWD3-207ENST00000611426 TNRC18O15417 2968 aaPredicted RBP26.81■■□□□ 1.88
CBWD3-207ENST00000611426 PNMA6EA0A0J9YXQ4 647 aa26.81■■□□□ 1.88
CBWD3-207ENST00000611426 CETPP11597 493 aa26.81■■□□□ 1.88
CBWD3-207ENST00000611426 TAF1CQ15572 869 aaPredicted RBP26.81■■□□□ 1.88
CBWD3-207ENST00000611426 SPTY2D1Q68D10 685 aaPredicted RBP26.81■■□□□ 1.88
CBWD3-207ENST00000611426 SLF2Q8IX21 1173 aa26.81■■□□□ 1.88
CBWD3-207ENST00000611426 ZFYVE28Q9HCC9 887 aa26.81■■□□□ 1.88
CBWD3-207ENST00000611426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.81■■□□□ 1.88
CBWD3-207ENST00000611426 MYH2Q9UKX2 1941 aa26.8■■□□□ 1.88
CBWD3-207ENST00000611426 IRF6O14896 467 aa26.8■■□□□ 1.88
CBWD3-207ENST00000611426 IRX6P78412 446 aaPredicted RBP26.8■■□□□ 1.88
CBWD3-207ENST00000611426 GORABQ5T7V8 394 aa26.8■■□□□ 1.88
CBWD3-207ENST00000611426 FAM43AQ8N2R8 423 aa26.8■■□□□ 1.88
CBWD3-207ENST00000611426 INPP5BP32019 993 aa26.79■■□□□ 1.88
CBWD3-207ENST00000611426 PPIL2Q13356 520 aa26.79■■□□□ 1.88
CBWD3-207ENST00000611426 SNAPC2Q13487 334 aa26.79■■□□□ 1.88
CBWD3-207ENST00000611426 PPP4R2Q9NY27 417 aa26.79■■□□□ 1.88
CBWD3-207ENST00000611426 WDHD1O75717 1129 aaPredicted RBP26.78■■□□□ 1.88
CBWD3-207ENST00000611426 PPATQ06203 517 aa26.78■■□□□ 1.88
CBWD3-207ENST00000611426 ZFPM1Q8IX07 1006 aa26.78■■□□□ 1.88
CBWD3-207ENST00000611426 EFCC1Q9HA90 598 aa26.78■■□□□ 1.88
CBWD3-207ENST00000611426 ZNF112Q9UJU3 913 aa26.78■■□□□ 1.88
CBWD3-207ENST00000611426 GAKO14976 1311 aa26.78■■□□□ 1.88
CBWD3-207ENST00000611426 ERICH6Q7L0X2 663 aa26.77■■□□□ 1.88
CBWD3-207ENST00000611426 FAM163AQ96GL9 167 aaPredicted RBP26.77■■□□□ 1.88
CBWD3-207ENST00000611426 IDI2Q9BXS1 227 aa26.77■■□□□ 1.88
CBWD3-207ENST00000611426 RGS3P49796 1198 aa26.76■■□□□ 1.87
CBWD3-207ENST00000611426 PTPN22Q9Y2R2 807 aa26.76■■□□□ 1.87
CBWD3-207ENST00000611426 ENTPD3O75355 529 aa26.75■■□□□ 1.87
CBWD3-207ENST00000611426 FTSJ3Q8IY81 847 aaKnown RBP26.75■■□□□ 1.87
CBWD3-207ENST00000611426 SPATA5Q8NB90 893 aa26.75■■□□□ 1.87
CBWD3-207ENST00000611426 HMG20BQ9P0W2 317 aa26.75■■□□□ 1.87
CBWD3-207ENST00000611426 BTBD19C9JJ37 291 aa26.74■■□□□ 1.87
CBWD3-207ENST00000611426 BTDP43251 543 aa26.74■■□□□ 1.87
CBWD3-207ENST00000611426 MECOMQ03112 1051 aa26.74■■□□□ 1.87
CBWD3-207ENST00000611426 ZCCHC17Q9NP64 241 aaKnown RBP26.74■■□□□ 1.87
CBWD3-207ENST00000611426 PDE3AQ14432 1141 aa26.73■■□□□ 1.87
CBWD3-207ENST00000611426 ARHGEF6Q15052 776 aa26.73■■□□□ 1.87
CBWD3-207ENST00000611426 ZSCAN29Q8IWY8 852 aaPredicted RBP26.73■■□□□ 1.87
CBWD3-207ENST00000611426 MROH7-TTC4A0A0A0MT08 1334 aa26.73■■□□□ 1.87
CBWD3-207ENST00000611426 ATP8B2P98198 1209 aa26.72■■□□□ 1.87
CBWD3-207ENST00000611426 HTTP42858 3142 aa26.72■■□□□ 1.87
CBWD3-207ENST00000611426 TLR2O60603 784 aa26.71■■□□□ 1.87
CBWD3-207ENST00000611426 ARID4AP29374 1257 aaPredicted RBP26.71■■□□□ 1.87
CBWD3-207ENST00000611426 CAP1Q01518 475 aa26.71■■□□□ 1.87
CBWD3-207ENST00000611426 OS9Q13438 667 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms