RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SPATA5Q8NB90 893 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 GPR101Q96P66 508 aaPredicted RBP18.59■□□□□ 0.57
RTN1-209ENST00000611068 NCAPGQ9BPX3 1015 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 CYP21A2P08686 494 aa18.58■□□□□ 0.57
RTN1-209ENST00000611068 SLC10A5Q5PT55 438 aa18.58■□□□□ 0.57
RTN1-209ENST00000611068 BCCIPQ9P287 314 aaKnown RBP eCLIP18.58■□□□□ 0.57
RTN1-209ENST00000611068 HSPD1P10809 573 aaKnown RBP18.58■□□□□ 0.56
RTN1-209ENST00000611068 CASQ1P31415 396 aa18.58■□□□□ 0.56
RTN1-209ENST00000611068 AXDND1Q5T1B0 1012 aaPredicted RBP18.58■□□□□ 0.56
RTN1-209ENST00000611068 CYP46A1Q9Y6A2 500 aa18.58■□□□□ 0.56
RTN1-209ENST00000611068 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 PRR5LQ6MZQ0 368 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 KRBA2Q6ZNG9 492 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 CHST3Q7LGC8 479 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
RTN1-209ENST00000611068 PAXBP1Q9Y5B6 917 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 SERPINB2P05120 415 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 TPM3P06753 285 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 TM4SF1P30408 202 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 GPATCH11Q8N954 259 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 ZNF622Q969S3 477 aaKnown RBP eCLIP18.57■□□□□ 0.56
RTN1-209ENST00000611068 TTC14Q96N46 770 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 ABCF2Q9UG63 623 aa18.57■□□□□ 0.56
RTN1-209ENST00000611068 CCDC183Q5T5S1 534 aa18.56■□□□□ 0.56
RTN1-209ENST00000611068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.56■□□□□ 0.56
RTN1-209ENST00000611068 HELLSQ9NRZ9 838 aa18.56■□□□□ 0.56
RTN1-209ENST00000611068 ZNF831Q5JPB2 1677 aa18.56■□□□□ 0.56
RTN1-209ENST00000611068 ZNF532Q9HCE3 1301 aa18.56■□□□□ 0.56
RTN1-209ENST00000611068 RNF20Q5VTR2 975 aa18.56■□□□□ 0.56
RTN1-209ENST00000611068 SCN7AQ01118 1682 aa18.56■□□□□ 0.56
RTN1-209ENST00000611068 DDR1Q08345 913 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 STK3Q13188 491 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 MAGEB6Q8N7X4 407 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 BANK1Q8NDB2 785 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 ZSWIM6Q9HCJ5 1215 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 CARMIL3Q8ND23 1372 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 ARID4AP29374 1257 aaPredicted RBP18.55■□□□□ 0.56
RTN1-209ENST00000611068 STOX1Q6ZVD7 989 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 CCDC186Q7Z3E2 898 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 COL23A1Q86Y22 540 aaPredicted RBP18.55■□□□□ 0.56
RTN1-209ENST00000611068 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 NRBP1Q9UHY1 535 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
RTN1-209ENST00000611068 MYO5AQ9Y4I1 1855 aaKnown RBP18.55■□□□□ 0.56
RTN1-209ENST00000611068 GPAA1O43292 621 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 GUCY2CP25092 1073 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 MUM1L1Q5H9M0 696 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 GIMAP6Q6P9H5 292 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 BLOC1S2Q6QNY1 142 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 GOLGA6L6A8MZA4 724 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 UQCRFS1P1P0C7P4 283 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 CCDC83Q8IWF9 413 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 FHOD1Q9Y613 1164 aa18.54■□□□□ 0.56
RTN1-209ENST00000611068 POLR3GO15318 223 aaPredicted RBP18.53■□□□□ 0.56
RTN1-209ENST00000611068 FOXP2O15409 715 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 EPB41L2O43491 1005 aaKnown RBP18.53■□□□□ 0.56
RTN1-209ENST00000611068 PDE6AP16499 860 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 TSGA10IPQ3SY00 556 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 MIGA1Q8NAN2 632 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 PPFIA3O75145 1194 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 ST5P78524 1137 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 TPD52L1Q16890 204 aaPredicted RBP18.53■□□□□ 0.56
RTN1-209ENST00000611068 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.53■□□□□ 0.56
RTN1-209ENST00000611068 LRP2BPQ9P2M1 347 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 U3KPZ7 1027 aaPredicted RBP18.53■□□□□ 0.56
RTN1-209ENST00000611068 RTL9Q8NET4 1388 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 ADD2P35612 726 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 EN1Q05925 392 aaPredicted RBP18.53■□□□□ 0.56
RTN1-209ENST00000611068 CEP135Q66GS9 1140 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 APPBP2Q92624 585 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 FUCA2Q9BTY2 467 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 LIMCH1Q9UPQ0 1083 aa18.53■□□□□ 0.56
RTN1-209ENST00000611068 AKAP11Q9UKA4 1901 aa18.52■□□□□ 0.56
RTN1-209ENST00000611068 ADRA2BP18089 450 aa18.52■□□□□ 0.56
RTN1-209ENST00000611068 PLA2G4AP47712 749 aa18.52■□□□□ 0.56
RTN1-209ENST00000611068 RPGRQ92834 1020 aaKnown RBP18.52■□□□□ 0.56
RTN1-209ENST00000611068 KCNB2Q92953 911 aa18.52■□□□□ 0.56
RTN1-209ENST00000611068 DRC1Q96MC2 740 aa18.52■□□□□ 0.56
RTN1-209ENST00000611068 TPCN1Q9ULQ1 816 aa18.52■□□□□ 0.56
RTN1-209ENST00000611068 FGAP02671 866 aa18.52■□□□□ 0.55
RTN1-209ENST00000611068 SART3Q15020 963 aaKnown RBP18.52■□□□□ 0.55
RTN1-209ENST00000611068 FAM84BQ96KN1 310 aaPredicted RBP18.52■□□□□ 0.55
RTN1-209ENST00000611068 NEK1Q96PY6 1258 aa18.52■□□□□ 0.55
RTN1-209ENST00000611068 MCM2P49736 904 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 ME3Q16798 604 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 CTR9Q6PD62 1173 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 UTRNP46939 3433 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
RTN1-209ENST00000611068 TTF1Q15361 905 aaPredicted RBP18.51■□□□□ 0.55
RTN1-209ENST00000611068 IL17RAQ96F46 866 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 ARMT1Q9H993 441 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 INCENPQ9NQS7 918 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 DENND2AQ9ULE3 1009 aa18.51■□□□□ 0.55
RTN1-209ENST00000611068 RPS6KB1P23443 525 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 PSMA5P28066 241 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms