RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 ME1P48163 572 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 ADALQ6DHV7 355 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 CYP27B1O15528 508 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 NBPF7P0C2Y1 421 aaPredicted RBP13.73□□□□□ -0.21
TP53-220ENST00000610623 FANCCQ00597 558 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 UTP14AQ9BVJ6 771 aaKnown RBP13.73□□□□□ -0.21
TP53-220ENST00000610623 EPC1Q9H2F5 836 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 DEF6Q9H4E7 631 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 UTYO14607 1347 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
TP53-220ENST00000610623 VWA3AA6NCI4 1184 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 EIF3CLB5ME19 914 aaKnown RBP13.73□□□□□ -0.21
TP53-220ENST00000610623 EIF3JO75822 258 aaKnown RBP13.73□□□□□ -0.21
TP53-220ENST00000610623 ATP2B1P20020 1258 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 NLRP12P59046 1061 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 TUBB4BP68371 445 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 NCAPHQ15003 741 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 PDIA6Q15084 440 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 HDXQ7Z353 690 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 PACS2Q86VP3 889 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 EIF3CQ99613 913 aaKnown RBP13.73□□□□□ -0.21
TP53-220ENST00000610623 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
TP53-220ENST00000610623 PCDH11XQ9BZA7 1347 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 PCDH11YQ9BZA8 1340 aa13.73□□□□□ -0.21
TP53-220ENST00000610623 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
TP53-220ENST00000610623 CORO7P57737 925 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
TP53-220ENST00000610623 FMNL2Q96PY5 1086 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 TRAIPQ9BWF2 469 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 PPP2R2CQ9Y2T4 447 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 UBR2Q8IWV8 1755 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 PRAMEF22A3QJZ6 481 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 NEK1Q96PY6 1258 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 VPS18Q9P253 973 aa13.72□□□□□ -0.21
TP53-220ENST00000610623 GLI3P10071 1580 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 LOC102724159A0A0B4J2E5 919 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 MYO1BO43795 1136 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 USP5P45974 858 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 CABP4P57796 275 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 GNG11P61952 73 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 SLC39A6Q13433 755 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 PWP2Q15269 919 aaKnown RBP13.71□□□□□ -0.21
TP53-220ENST00000610623 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
TP53-220ENST00000610623 A6NJR5 290 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 CPP00450 1065 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
TP53-220ENST00000610623 SECISBP2LQ93073 1101 aaKnown RBP13.7□□□□□ -0.22
TP53-220ENST00000610623 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 FTOQ9C0B1 505 aaKnown RBP eCLIP13.7□□□□□ -0.22
TP53-220ENST00000610623 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 GRM8O00222 908 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 PFKFB2O60825 505 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 ERLIN1O75477 346 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 SLC3A2P08195 630 aaKnown RBP13.7□□□□□ -0.22
TP53-220ENST00000610623 HSP90B1P14625 803 aaKnown RBP13.7□□□□□ -0.22
TP53-220ENST00000610623 UBASH3AP57075 661 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 NEXNQ0ZGT2 675 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 SCRN1Q12765 414 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 SWT1Q5T5J6 900 aaKnown RBP13.7□□□□□ -0.22
TP53-220ENST00000610623 Q6ZUG5 572 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 ZNF496Q96IT1 587 aaPredicted RBP13.7□□□□□ -0.22
TP53-220ENST00000610623 CARD10Q9BWT7 1032 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
TP53-220ENST00000610623 BEND6Q5SZJ8 279 aaPredicted RBP13.69□□□□□ -0.22
TP53-220ENST00000610623 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 VSTM4Q8IW00 320 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 ZCRB1Q8TBF4 217 aaKnown RBP13.69□□□□□ -0.22
TP53-220ENST00000610623 PDE11AQ9HCR9 933 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 RAB21Q9UL25 225 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 ARFGEF2Q9Y6D5 1785 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 AFDNP55196 1824 aaKnown RBP13.69□□□□□ -0.22
TP53-220ENST00000610623 ERVV-2B6SEH9 535 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 GPR37O15354 613 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 LMOD1P29536 600 aaPredicted RBP13.69□□□□□ -0.22
TP53-220ENST00000610623 NDUFA8P51970 172 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
TP53-220ENST00000610623 AACSQ86V21 672 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 EFCAB13Q8IY85 973 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
TP53-220ENST00000610623 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 WDR24Q96S15 920 aa13.69□□□□□ -0.22
TP53-220ENST00000610623 A0A1B0GVL5 298 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 STX10O60499 249 aa13.68□□□□□ -0.22
TP53-220ENST00000610623 TAF5LO75529 589 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms