RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
LINC00343-212ENST00000608624 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
LINC00343-212ENST00000608624 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
LINC00343-212ENST00000608624 SEMA3EO15041 775 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 USP17L8P0C7I0 530 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 UQCRFS1P1P0C7P4 283 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
LINC00343-212ENST00000608624 MX1P20591 662 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
LINC00343-212ENST00000608624 FMR1Q06787 632 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC00343-212ENST00000608624 NBPF9Q3BBW0 867 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 CCDC158Q5M9N0 1113 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 ADGRA1Q86SQ6 560 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 DPF2Q92785 391 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 GNL3LQ9NVN8 582 aaKnown RBP11.04□□□□□ -0.64
LINC00343-212ENST00000608624 ABCF2Q9UG63 623 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 DENND2AQ9ULE3 1009 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 TTF2Q9UNY4 1162 aaKnown RBP11.04□□□□□ -0.64
LINC00343-212ENST00000608624 PDS5AQ29RF7 1337 aaKnown RBP11.04□□□□□ -0.64
LINC00343-212ENST00000608624 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
LINC00343-212ENST00000608624 MYH2Q9UKX2 1941 aa11.03□□□□□ -0.64
LINC00343-212ENST00000608624 POLR2AP24928 1970 aaKnown RBP11.03□□□□□ -0.64
LINC00343-212ENST00000608624 GOLIM4O00461 696 aa11.03□□□□□ -0.64
LINC00343-212ENST00000608624 ATP5JP18859 108 aa11.03□□□□□ -0.64
LINC00343-212ENST00000608624 LMOD1P29536 600 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-212ENST00000608624 FKBP1AP62942 108 aaKnown RBP11.03□□□□□ -0.64
LINC00343-212ENST00000608624 KIF4BQ2VIQ3 1234 aa11.03□□□□□ -0.64
LINC00343-212ENST00000608624 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
LINC00343-212ENST00000608624 ZBED3Q96IU2 234 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-212ENST00000608624 ZNF512BQ96KM6 892 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-212ENST00000608624 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
LINC00343-212ENST00000608624 ECHDC1Q9NTX5 307 aa11.03□□□□□ -0.64
LINC00343-212ENST00000608624 VEGFAP15692 232 aaPredicted RBP11.02□□□□□ -0.65
LINC00343-212ENST00000608624 CRKP46108 304 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 CACNB3P54284 484 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 PDE1AP54750 535 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 MECOMQ03112 1051 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 CFAP100Q494V2 611 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 MAP1SQ66K74 1059 aaPredicted RBP11.02□□□□□ -0.65
LINC00343-212ENST00000608624 WDR66Q8TBY9 1149 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 CCDC136Q96JN2 1154 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 HAUS7Q99871 368 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 ADARB2Q9NS39 739 aaKnown RBP11.02□□□□□ -0.65
LINC00343-212ENST00000608624 GGA3Q9NZ52 723 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 DAGLAQ9Y4D2 1042 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 MYO3BQ8WXR4 1341 aa11.02□□□□□ -0.65
LINC00343-212ENST00000608624 ECM29Q5VYK3 1845 aa11.01□□□□□ -0.65
LINC00343-212ENST00000608624 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
LINC00343-212ENST00000608624 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
LINC00343-212ENST00000608624 WNT10BO00744 389 aa11.01□□□□□ -0.65
LINC00343-212ENST00000608624 LDHBP07195 334 aaKnown RBP11.01□□□□□ -0.65
LINC00343-212ENST00000608624 TBC1D22AQ8WUA7 517 aa11.01□□□□□ -0.65
LINC00343-212ENST00000608624 NSUN4Q96CB9 384 aaKnown RBP11.01□□□□□ -0.65
LINC00343-212ENST00000608624 PRMT6Q96LA8 375 aaPredicted RBP11.01□□□□□ -0.65
LINC00343-212ENST00000608624 STAP2Q9UGK3 403 aa11.01□□□□□ -0.65
LINC00343-212ENST00000608624 MYH7P12883 1935 aa11.01□□□□□ -0.65
LINC00343-212ENST00000608624 ADM5C9JUS6 153 aa11□□□□□ -0.65
LINC00343-212ENST00000608624 H7C1D1 291 aa11□□□□□ -0.65
LINC00343-212ENST00000608624 TRAF5O00463 557 aa11□□□□□ -0.65
LINC00343-212ENST00000608624 IDH1O75874 414 aaKnown RBP11□□□□□ -0.65
LINC00343-212ENST00000608624 APOBEC3HQ6NTF7 200 aaKnown RBP11□□□□□ -0.65
LINC00343-212ENST00000608624 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
LINC00343-212ENST00000608624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11□□□□□ -0.65
LINC00343-212ENST00000608624 PAG1Q9NWQ8 432 aa11□□□□□ -0.65
LINC00343-212ENST00000608624 PPP4R2Q9NY27 417 aa11□□□□□ -0.65
LINC00343-212ENST00000608624 RAI14Q9P0K7 980 aa11□□□□□ -0.65
LINC00343-212ENST00000608624 CDK5RAP2Q96SN8 1893 aa11□□□□□ -0.65
LINC00343-212ENST00000608624 GSPT1P15170 499 aaKnown RBP10.99□□□□□ -0.65
LINC00343-212ENST00000608624 PDE6AP16499 860 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 RBM5P52756 815 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00343-212ENST00000608624 ANGEL2Q5VTE6 544 aaKnown RBP10.99□□□□□ -0.65
LINC00343-212ENST00000608624 PRAMEF18Q5VWM3 479 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 GPR153Q6NV75 609 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 DZIP1Q86YF9 867 aaKnown RBP10.99□□□□□ -0.65
LINC00343-212ENST00000608624 GLIS2Q9BZE0 524 aaPredicted RBP10.99□□□□□ -0.65
LINC00343-212ENST00000608624 TDRD3Q9H7E2 651 aaKnown RBP10.99□□□□□ -0.65
LINC00343-212ENST00000608624 LRP2BPQ9P2M1 347 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 MROH7-TTC4A0A0A0MT08 1334 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 GAKO14976 1311 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 TTC41PQ6P2S7 1318 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 RFX7Q2KHR2 1363 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
LINC00343-212ENST00000608624 TCRBV5S4A2TA0A5A2 114 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 BTDP43251 543 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
LINC00343-212ENST00000608624 NFIAQ12857 509 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 DLGAP5Q15398 846 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 USP50Q70EL3 339 aaPredicted RBP10.98□□□□□ -0.65
LINC00343-212ENST00000608624 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 LDHDQ86WU2 507 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 MAGEB6Q8N7X4 407 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 TEKT1Q969V4 418 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 ZDHHC15Q96MV8 337 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 CNTNAP1P78357 1384 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
LINC00343-212ENST00000608624 GLRX3O76003 335 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms