RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 NDUFB9Q9Y6M9 179 aa17.8■□□□□ 0.44
HDDC2-204ENST00000608295 NFIAQ12857 509 aa17.79■□□□□ 0.44
HDDC2-204ENST00000608295 SUPT20HL1Q3ZLR7 823 aa17.79■□□□□ 0.44
HDDC2-204ENST00000608295 CDC42EP5Q6NZY7 148 aa17.79■□□□□ 0.44
HDDC2-204ENST00000608295 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
HDDC2-204ENST00000608295 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
HDDC2-204ENST00000608295 TEPSINQ96N21 525 aa17.79■□□□□ 0.44
HDDC2-204ENST00000608295 CASP8AP2Q9UKL3 1982 aa17.79■□□□□ 0.44
HDDC2-204ENST00000608295 PPP1R12BO60237 982 aaPredicted RBP17.78■□□□□ 0.44
HDDC2-204ENST00000608295 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
HDDC2-204ENST00000608295 BTDP43251 543 aa17.78■□□□□ 0.44
HDDC2-204ENST00000608295 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
HDDC2-204ENST00000608295 MECOMQ03112 1051 aa17.78■□□□□ 0.44
HDDC2-204ENST00000608295 PDE3AQ14432 1141 aa17.78■□□□□ 0.44
HDDC2-204ENST00000608295 CCDC158Q5M9N0 1113 aa17.78■□□□□ 0.44
HDDC2-204ENST00000608295 GPR108Q9NPR9 543 aa17.78■□□□□ 0.44
HDDC2-204ENST00000608295 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
HDDC2-204ENST00000608295 HMMRO75330 724 aa17.77■□□□□ 0.44
HDDC2-204ENST00000608295 PICALMQ13492 652 aa17.77■□□□□ 0.44
HDDC2-204ENST00000608295 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.44
HDDC2-204ENST00000608295 TNS4Q8IZW8 715 aa17.77■□□□□ 0.44
HDDC2-204ENST00000608295 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
HDDC2-204ENST00000608295 ELP3Q9H9T3 547 aa17.77■□□□□ 0.44
HDDC2-204ENST00000608295 LRP2BPQ9P2M1 347 aa17.77■□□□□ 0.44
HDDC2-204ENST00000608295 MROH7-TTC4A0A0A0MT08 1334 aa17.76■□□□□ 0.43
HDDC2-204ENST00000608295 PDS5AQ29RF7 1337 aaKnown RBP17.76■□□□□ 0.43
HDDC2-204ENST00000608295 USP2O75604 605 aaPredicted RBP17.76■□□□□ 0.43
HDDC2-204ENST00000608295 TRPA1O75762 1119 aa17.76■□□□□ 0.43
HDDC2-204ENST00000608295 ZAP70P43403 619 aa17.76■□□□□ 0.43
HDDC2-204ENST00000608295 IREB2P48200 963 aaKnown RBP17.76■□□□□ 0.43
HDDC2-204ENST00000608295 SPTY2D1Q68D10 685 aaPredicted RBP17.76■□□□□ 0.43
HDDC2-204ENST00000608295 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
HDDC2-204ENST00000608295 CSRNP1Q96S65 589 aa17.76■□□□□ 0.43
HDDC2-204ENST00000608295 CAPN15O75808 1086 aa17.75■□□□□ 0.43
HDDC2-204ENST00000608295 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
HDDC2-204ENST00000608295 MIGA2Q7L4E1 593 aa17.75■□□□□ 0.43
HDDC2-204ENST00000608295 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
HDDC2-204ENST00000608295 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
HDDC2-204ENST00000608295 SLC10A4Q96EP9 437 aa17.75■□□□□ 0.43
HDDC2-204ENST00000608295 GAKO14976 1311 aa17.74■□□□□ 0.43
HDDC2-204ENST00000608295 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
HDDC2-204ENST00000608295 RGS3P49796 1198 aa17.74■□□□□ 0.43
HDDC2-204ENST00000608295 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
HDDC2-204ENST00000608295 ZFPM1Q8IX07 1006 aa17.74■□□□□ 0.43
HDDC2-204ENST00000608295 MRIQ9BWK5 157 aa17.74■□□□□ 0.43
HDDC2-204ENST00000608295 CHMP4BQ9H444 224 aaKnown RBP17.74■□□□□ 0.43
HDDC2-204ENST00000608295 PIH1D3Q9NQM4 214 aaKnown RBP17.74■□□□□ 0.43
HDDC2-204ENST00000608295 FAM198AQ9UFP1 575 aa17.74■□□□□ 0.43
HDDC2-204ENST00000608295 CDK5RAP2Q96SN8 1893 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
HDDC2-204ENST00000608295 SLURP2P0DP57 97 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 VGLL4Q14135 290 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 HSP90AB4PQ58FF6 505 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 SPRYD7Q5W111 196 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
HDDC2-204ENST00000608295 WNK4Q96J92 1243 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 WRNIP1Q96S55 665 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 CRBNQ96SW2 442 aa17.73■□□□□ 0.43
HDDC2-204ENST00000608295 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 RPAP1Q9BWH6 1393 aaPredicted RBP17.72■□□□□ 0.43
HDDC2-204ENST00000608295 IDH1O75874 414 aaKnown RBP17.72■□□□□ 0.43
HDDC2-204ENST00000608295 GJA5P36382 358 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 MAP3K11Q16584 847 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 FAM83AQ86UY5 434 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 SLF2Q8IX21 1173 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 ANKRD13AQ8IZ07 590 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 CLASRPQ8N2M8 674 aaKnown RBP17.72■□□□□ 0.43
HDDC2-204ENST00000608295 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
HDDC2-204ENST00000608295 RNF186Q9NXI6 227 aa17.72■□□□□ 0.43
HDDC2-204ENST00000608295 IFIT2P09913 472 aaKnown RBP17.71■□□□□ 0.43
HDDC2-204ENST00000608295 NAA16Q6N069 864 aaPredicted RBP17.71■□□□□ 0.43
HDDC2-204ENST00000608295 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.71■□□□□ 0.43
HDDC2-204ENST00000608295 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.43
HDDC2-204ENST00000608295 FAM151AQ8WW52 585 aa17.71■□□□□ 0.43
HDDC2-204ENST00000608295 ZKSCAN4Q969J2 545 aaPredicted RBP17.71■□□□□ 0.43
HDDC2-204ENST00000608295 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
HDDC2-204ENST00000608295 OTUD5Q96G74 571 aa17.71■□□□□ 0.43
HDDC2-204ENST00000608295 DNAJC2Q99543 621 aaKnown RBP17.71■□□□□ 0.43
HDDC2-204ENST00000608295 PRDM10Q9NQV6 1147 aa17.71■□□□□ 0.43
HDDC2-204ENST00000608295 CSADQ9Y600 493 aa17.71■□□□□ 0.43
HDDC2-204ENST00000608295 CA12O43570 354 aa17.7■□□□□ 0.42
HDDC2-204ENST00000608295 WDHD1O75717 1129 aaPredicted RBP17.7■□□□□ 0.42
HDDC2-204ENST00000608295 TBC1D8O95759 1140 aa17.7■□□□□ 0.42
HDDC2-204ENST00000608295 INPP5BP32019 993 aa17.7■□□□□ 0.42
HDDC2-204ENST00000608295 GSTO1P78417 241 aa17.7■□□□□ 0.42
HDDC2-204ENST00000608295 FKBP1CQ5VVH2 108 aa17.7■□□□□ 0.42
HDDC2-204ENST00000608295 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.7■□□□□ 0.427e-6■■■□□ 14.8
HDDC2-204ENST00000608295 SH3RF3Q8TEJ3 882 aaPredicted RBP17.7■□□□□ 0.42
HDDC2-204ENST00000608295 AATFQ9NY61 560 aaKnown RBP eCLIP17.7■□□□□ 0.42
HDDC2-204ENST00000608295 LAMB1P07942 1786 aa17.7■□□□□ 0.42
HDDC2-204ENST00000608295 FAM196BA6NMK8 535 aa17.69■□□□□ 0.42
HDDC2-204ENST00000608295 SLC4A8Q2Y0W8 1093 aa17.69■□□□□ 0.42
HDDC2-204ENST00000608295 TEX11Q8IYF3 940 aa17.69■□□□□ 0.42
HDDC2-204ENST00000608295 EDC3Q96F86 508 aaKnown RBP17.69■□□□□ 0.42
HDDC2-204ENST00000608295 NOL10Q9BSC4 688 aaKnown RBP17.69■□□□□ 0.42
HDDC2-204ENST00000608295 FOCADQ5VW36 1801 aa17.69■□□□□ 0.42
HDDC2-204ENST00000608295 GPR75-ASB3A0A0A6YYF3 556 aa17.68■□□□□ 0.42
HDDC2-204ENST00000608295 DDTLA6NHG4 134 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms