RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 TRIM56Q9BRZ2 755 aaKnown RBP8.01□□□□□ -1.13
CTSS-206ENST00000607427 POLIQ9UNA4 740 aa8.01□□□□□ -1.13
CTSS-206ENST00000607427 AMOTL2Q9Y2J4 779 aa8.01□□□□□ -1.13
CTSS-206ENST00000607427 LRRC10BA6NIK2 292 aa8□□□□□ -1.13
CTSS-206ENST00000607427 ECEL1O95672 775 aa8□□□□□ -1.13
CTSS-206ENST00000607427 MPSTP25325 297 aa8□□□□□ -1.13
CTSS-206ENST00000607427 CD96P40200 585 aa8□□□□□ -1.13
CTSS-206ENST00000607427 CORO1BQ9BR76 489 aa8□□□□□ -1.13
CTSS-206ENST00000607427 A0A096LPE4 126 aa7.99□□□□□ -1.13
CTSS-206ENST00000607427 A0A1W2PPZ6 126 aa7.99□□□□□ -1.13
CTSS-206ENST00000607427 FAM87AP0C7U9 286 aa7.99□□□□□ -1.13
CTSS-206ENST00000607427 FLAD1Q8NFF5 587 aa7.99□□□□□ -1.13
CTSS-206ENST00000607427 TOX2Q96NM4 488 aa7.99□□□□□ -1.13
CTSS-206ENST00000607427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.99□□□□□ -1.13
CTSS-206ENST00000607427 U3KQE9 123 aa7.99□□□□□ -1.13
CTSS-206ENST00000607427 SYNGAP1Q96PV0 1343 aa7.99□□□□□ -1.13
CTSS-206ENST00000607427 ARID3CA6NKF2 412 aa7.98□□□□□ -1.13
CTSS-206ENST00000607427 AOC2O75106 756 aa7.98□□□□□ -1.13
CTSS-206ENST00000607427 CDK5R2Q13319 367 aa7.98□□□□□ -1.13
CTSS-206ENST00000607427 CCNJLQ8IV13 435 aa7.98□□□□□ -1.13
CTSS-206ENST00000607427 B3GALT4O96024 378 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 RAP1GAPP47736 663 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 EHHADHQ08426 723 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 IFI16Q16666 785 aaKnown RBP7.97□□□□□ -1.13
CTSS-206ENST00000607427 LILRA6Q6PI73 481 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 ZSWIM9Q86XI8 627 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 C1QL4Q86Z23 238 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 HRASLS5Q96KN8 279 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 WDR18Q9BV38 432 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 MKNK2Q9HBH9 465 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 PPP1R9AQ9ULJ8 1098 aa7.97□□□□□ -1.13
CTSS-206ENST00000607427 PPP1R15AO75807 674 aaPredicted RBP7.96□□□□□ -1.14
CTSS-206ENST00000607427 TSPAN15O95858 294 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 CFPP27918 469 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 GRIA4P48058 902 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 AOC3Q16853 763 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 ALKBH2Q6NS38 261 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 SLC23A3Q6PIS1 610 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 DDX54Q8TDD1 881 aaKnown RBP7.96□□□□□ -1.14
CTSS-206ENST00000607427 FAM53CQ9NYF3 392 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 NCANO14594 1321 aa7.96□□□□□ -1.14
CTSS-206ENST00000607427 ZNF503-AS2A6NEH8 195 aa7.95□□□□□ -1.14
CTSS-206ENST00000607427 TMEM88BA6NKF7 163 aa7.95□□□□□ -1.14
CTSS-206ENST00000607427 SSFA2P28290 1259 aa7.95□□□□□ -1.14
CTSS-206ENST00000607427 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
CTSS-206ENST00000607427 LCNL1Q6ZST4 164 aa7.95□□□□□ -1.14
CTSS-206ENST00000607427 GTF3C2Q8WUA4 911 aaPredicted RBP7.95□□□□□ -1.14
CTSS-206ENST00000607427 TCF12Q99081 682 aa7.95□□□□□ -1.14
CTSS-206ENST00000607427 ZFYVE28Q9HCC9 887 aa7.95□□□□□ -1.14
CTSS-206ENST00000607427 CRIM1Q9NZV1 1036 aa7.95□□□□□ -1.14
CTSS-206ENST00000607427 USP5P45974 858 aa7.94□□□□□ -1.14
CTSS-206ENST00000607427 PDE3AQ14432 1141 aa7.94□□□□□ -1.14
CTSS-206ENST00000607427 LRRC56Q8IYG6 542 aaPredicted RBP7.94□□□□□ -1.14
CTSS-206ENST00000607427 CCDC82Q8N4S0 544 aa7.94□□□□□ -1.14
CTSS-206ENST00000607427 ZSCAN18Q8TBC5 510 aaPredicted RBP7.94□□□□□ -1.14
CTSS-206ENST00000607427 A0A1W2PP55 124 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 PRRG2O14669 202 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 POLR3DP05423 398 aaPredicted RBP7.93□□□□□ -1.14
CTSS-206ENST00000607427 CEACAM5P06731 702 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 OXCT1P55809 520 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 KCNMB1Q16558 191 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 MLANAQ16655 118 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 PPP1R16BQ96T49 567 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 LIN7BQ9HAP6 207 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
CTSS-206ENST00000607427 TMEM265A0A087WTH1 108 aa7.92□□□□□ -1.14
CTSS-206ENST00000607427 TMPRSS2O15393 492 aa7.92□□□□□ -1.14
CTSS-206ENST00000607427 NPR3P17342 541 aa7.92□□□□□ -1.14
CTSS-206ENST00000607427 SIAH1Q8IUQ4 282 aa7.92□□□□□ -1.14
CTSS-206ENST00000607427 PIDD1Q9HB75 910 aa7.92□□□□□ -1.14
CTSS-206ENST00000607427 PLAGL2Q9UPG8 496 aa7.92□□□□□ -1.14
CTSS-206ENST00000607427 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
CTSS-206ENST00000607427 ATXN3LQ9H3M9 355 aa7.91□□□□□ -1.14
CTSS-206ENST00000607427 ZNF576Q9H609 170 aa7.91□□□□□ -1.14
CTSS-206ENST00000607427 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.9□□□□□ -1.14
CTSS-206ENST00000607427 LEFTY1O75610 366 aa7.9□□□□□ -1.14
CTSS-206ENST00000607427 AP3B2Q13367 1082 aa7.9□□□□□ -1.14
CTSS-206ENST00000607427 MTMR3Q13615 1198 aa7.9□□□□□ -1.14
CTSS-206ENST00000607427 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
CTSS-206ENST00000607427 GALNT12Q8IXK2 581 aa7.9□□□□□ -1.14
CTSS-206ENST00000607427 GJD3Q8N144 294 aa7.9□□□□□ -1.14
CTSS-206ENST00000607427 FANCD2OSQ96PS1 177 aa7.9□□□□□ -1.14
CTSS-206ENST00000607427 B8ZZF3 427 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 FAM13AO94988 1023 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 ZSCAN22P10073 491 aaPredicted RBP7.89□□□□□ -1.15
CTSS-206ENST00000607427 AAMPQ13685 434 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 SMYD4Q8IYR2 804 aaPredicted RBP7.89□□□□□ -1.15
CTSS-206ENST00000607427 LIN37Q96GY3 246 aaPredicted RBP7.89□□□□□ -1.15
CTSS-206ENST00000607427 DUSP23Q9BVJ7 150 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 TNKS2Q9H2K2 1166 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 PRDM7Q9NQW5 492 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 LMCD1Q9NZU5 365 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
CTSS-206ENST00000607427 FZD6O60353 706 aa7.88□□□□□ -1.15
CTSS-206ENST00000607427 ID3Q02535 119 aa7.88□□□□□ -1.15
CTSS-206ENST00000607427 SF3B2Q13435 895 aaKnown RBP7.88□□□□□ -1.15
CTSS-206ENST00000607427 ANKLE2Q86XL3 938 aa7.88□□□□□ -1.15
CTSS-206ENST00000607427 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
CTSS-206ENST00000607427 ITPKAP23677 461 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms