RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 TM4SF4P48230 202 aa17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 CACNB3P54284 484 aa17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 DIXDC1Q155Q3 683 aa17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 TTC39AQ5SRH9 613 aa17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 SPATA5Q8NB90 893 aa17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
PKNOX1-210ENST00000607049 CAPN15O75808 1086 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 LDHCP07864 332 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 CEP85Q6P2H3 762 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 FAM151AQ8WW52 585 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 TEPSINQ96N21 525 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 FZD1Q9UP38 647 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
PKNOX1-210ENST00000607049 ARID4AP29374 1257 aaPredicted RBP17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 MAP3K9P80192 1104 aa17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 RPAP2Q8IXW5 612 aaPredicted RBP17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 WNK4Q96J92 1243 aa17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 CLMNQ96JQ2 1002 aa17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 NOL10Q9BSC4 688 aaKnown RBP17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 HMG20BQ9P0W2 317 aa17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
PKNOX1-210ENST00000607049 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
PKNOX1-210ENST00000607049 RPAP1Q9BWH6 1393 aaPredicted RBP17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 MYH13Q9UKX3 1938 aa17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 SSC5DA1L4H1 1573 aa17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 TCP10Q12799 353 aa17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 PDE3AQ14432 1141 aa17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 FAM163AQ96GL9 167 aaPredicted RBP17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 ZNF341Q9BYN7 854 aa17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 ELP3Q9H9T3 547 aa17.66■□□□□ 0.42
PKNOX1-210ENST00000607049 IGSF3O75054 1194 aa17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 MECOMQ03112 1051 aa17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 ZSCAN29Q8IWY8 852 aaPredicted RBP17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 OPTNQ96CV9 577 aa17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 MROH7-TTC4A0A0A0MT08 1334 aa17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 GAKO14976 1311 aa17.65■□□□□ 0.42
PKNOX1-210ENST00000607049 ENTPD3O75355 529 aa17.64■□□□□ 0.41
PKNOX1-210ENST00000607049 BTDP43251 543 aa17.64■□□□□ 0.41
PKNOX1-210ENST00000607049 VGLL4Q14135 290 aa17.64■□□□□ 0.41
PKNOX1-210ENST00000607049 CDAN1Q8IWY9 1227 aa17.64■□□□□ 0.41
PKNOX1-210ENST00000607049 ZNF512BQ96KM6 892 aaPredicted RBP17.64■□□□□ 0.41
PKNOX1-210ENST00000607049 DBNDD2Q9BQY9 259 aa17.64■□□□□ 0.41
PKNOX1-210ENST00000607049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.64■□□□□ 0.41
PKNOX1-210ENST00000607049 TBC1D8O95759 1140 aa17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 MCAMP43121 646 aa17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 GTF2A2P52657 109 aa17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 DGKZQ13574 1117 aa17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 ZBTB40Q9NUA8 1239 aa17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 EXOC6BQ9Y2D4 811 aa17.63■□□□□ 0.41
PKNOX1-210ENST00000607049 AKAP11Q9UKA4 1901 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 BAG3O95817 575 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 NFIAQ12857 509 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 NOM1Q5C9Z4 860 aaKnown RBP17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 MIGA2Q7L4E1 593 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 IFNL1Q8IU54 200 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 ABHD8Q96I13 439 aa17.62■□□□□ 0.41
PKNOX1-210ENST00000607049 PLCG2P16885 1265 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 RGS3P49796 1198 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 NAA16Q6N069 864 aaPredicted RBP17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 PI16Q6UXB8 463 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 AACSQ86V21 672 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 KIF1BPQ96EK5 621 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 OTUD5Q96G74 571 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 CFHR5Q9BXR6 569 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 CCDC8Q9H0W5 538 aaPredicted RBP17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 FAM198AQ9UFP1 575 aa17.61■□□□□ 0.41
PKNOX1-210ENST00000607049 SPDYE5A6NIY4 337 aa17.6■□□□□ 0.41
PKNOX1-210ENST00000607049 RAB11FIP3O75154 756 aa17.6■□□□□ 0.41
PKNOX1-210ENST00000607049 PICALMQ13492 652 aa17.6■□□□□ 0.41
PKNOX1-210ENST00000607049 CTU1Q7Z7A3 348 aaKnown RBP17.6■□□□□ 0.41
PKNOX1-210ENST00000607049 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
PKNOX1-210ENST00000607049 MCOLN1Q9GZU1 580 aa17.6■□□□□ 0.41
PKNOX1-210ENST00000607049 DBNLQ9UJU6 430 aaKnown RBP17.6■□□□□ 0.41
PKNOX1-210ENST00000607049 GPR25O00155 361 aa17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 FKTNO75072 461 aa17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 CETPP11597 493 aa17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 SNAPC2Q13487 334 aa17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 PKN2Q16513 984 aaKnown RBP17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 RHPN1Q8TCX5 695 aa17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 ZKSCAN4Q969J2 545 aaPredicted RBP17.59■□□□□ 0.41
PKNOX1-210ENST00000607049 CCL15-CCL14A0A0B4J2E2 113 aa17.58■□□□□ 0.4
PKNOX1-210ENST00000607049 TESPA1A2RU30 521 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms