RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 RASA3Q14644 834 aa17.32■□□□□ 0.36
TUBE1-211ENST00000605457 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
TUBE1-211ENST00000605457 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
TUBE1-211ENST00000605457 TMOD2Q9NZR1 351 aa17.32■□□□□ 0.36
TUBE1-211ENST00000605457 IGHDP01880 384 aa17.32■□□□□ 0.36
TUBE1-211ENST00000605457 KLRG1Q96E93 195 aa17.32■□□□□ 0.36
TUBE1-211ENST00000605457 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
TUBE1-211ENST00000605457 THSD7BQ9C0I4 1608 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 GPR75-ASB3A0A0A6YYF3 556 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 LDHCP07864 332 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 BTDP43251 543 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 TNNI2P48788 182 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 ANKRD45Q5TZF3 282 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 NAA16Q6N069 864 aaPredicted RBP17.31■□□□□ 0.36
TUBE1-211ENST00000605457 FAM83AQ86UY5 434 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 DNAJC2Q99543 621 aaKnown RBP17.31■□□□□ 0.36
TUBE1-211ENST00000605457 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
TUBE1-211ENST00000605457 MKRN1Q9UHC7 482 aaKnown RBP17.31■□□□□ 0.36
TUBE1-211ENST00000605457 RPAP1Q9BWH6 1393 aaPredicted RBP17.3■□□□□ 0.36
TUBE1-211ENST00000605457 IDH1O75874 414 aaKnown RBP17.3■□□□□ 0.36
TUBE1-211ENST00000605457 NF2P35240 595 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 FKBP1BP68106 108 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
TUBE1-211ENST00000605457 C2orf69Q8N8R5 385 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 TEPSINQ96N21 525 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 HAUS7Q99871 368 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 TMEM39BQ9GZU3 492 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
TUBE1-211ENST00000605457 GOLIM4O00461 696 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 NFIAQ12857 509 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 DEFB115Q30KQ5 88 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 ADGRA1Q86SQ6 560 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 CDAN1Q8IWY9 1227 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
TUBE1-211ENST00000605457 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
TUBE1-211ENST00000605457 HHIPL1Q96JK4 782 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 PAG1Q9NWQ8 432 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 HUNKP57058 714 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 RHBDL3P58872 404 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 MAP3K12Q12852 859 aa17.29■□□□□ 0.36
TUBE1-211ENST00000605457 NBPF12Q5TAG4 269 aaPredicted RBP17.29■□□□□ 0.36
TUBE1-211ENST00000605457 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
TUBE1-211ENST00000605457 TTC41PQ6P2S7 1318 aa17.28■□□□□ 0.36
TUBE1-211ENST00000605457 MYH1P12882 1939 aa17.28■□□□□ 0.36
TUBE1-211ENST00000605457 SUPT20HL1Q3ZLR7 823 aa17.28■□□□□ 0.36
TUBE1-211ENST00000605457 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
TUBE1-211ENST00000605457 IDI2Q9BXS1 227 aa17.28■□□□□ 0.36
TUBE1-211ENST00000605457 FAM198AQ9UFP1 575 aa17.28■□□□□ 0.36
TUBE1-211ENST00000605457 WDHD1O75717 1129 aaPredicted RBP17.27■□□□□ 0.36
TUBE1-211ENST00000605457 MX1P20591 662 aa17.27■□□□□ 0.36
TUBE1-211ENST00000605457 MOB2Q70IA6 237 aa17.27■□□□□ 0.36
TUBE1-211ENST00000605457 MAGEB6Q8N7X4 407 aa17.27■□□□□ 0.36
TUBE1-211ENST00000605457 LAMB1P07942 1786 aa17.27■□□□□ 0.35
TUBE1-211ENST00000605457 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
TUBE1-211ENST00000605457 CYP7A1P22680 504 aa17.26■□□□□ 0.35
TUBE1-211ENST00000605457 VEGFBP49765 207 aa17.26■□□□□ 0.35
TUBE1-211ENST00000605457 TCP10Q12799 353 aa17.26■□□□□ 0.35
TUBE1-211ENST00000605457 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
TUBE1-211ENST00000605457 FAM151AQ8WW52 585 aa17.26■□□□□ 0.35
TUBE1-211ENST00000605457 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
TUBE1-211ENST00000605457 FZD1Q9UP38 647 aa17.26■□□□□ 0.35
TUBE1-211ENST00000605457 SIPA1L1O43166 1804 aa17.26■□□□□ 0.35
TUBE1-211ENST00000605457 NAV1Q8NEY1 1877 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 RGS3P49796 1198 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 PPP4CP60510 307 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 TTLL12Q14166 644 aaPredicted RBP17.25■□□□□ 0.35
TUBE1-211ENST00000605457 B4GALNT3Q6L9W6 998 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 NOL10Q9BSC4 688 aaKnown RBP17.25■□□□□ 0.35
TUBE1-211ENST00000605457 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
TUBE1-211ENST00000605457 DDX60LQ5H9U9 1706 aaKnown RBP17.25■□□□□ 0.35
TUBE1-211ENST00000605457 ENTPD3O75355 529 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 BAG3O95817 575 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 PDE6AP16499 860 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 NUCB1Q02818 461 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 PRKG1Q13976 671 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 MAP3K11Q16584 847 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 SLC9C2Q5TAH2 1124 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
TUBE1-211ENST00000605457 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 SH3RF3Q8TEJ3 882 aaPredicted RBP17.25■□□□□ 0.35
TUBE1-211ENST00000605457 CAPNS2Q96L46 248 aa17.25■□□□□ 0.35
TUBE1-211ENST00000605457 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
TUBE1-211ENST00000605457 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
TUBE1-211ENST00000605457 ERC2O15083 957 aa17.24■□□□□ 0.35
TUBE1-211ENST00000605457 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
TUBE1-211ENST00000605457 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
TUBE1-211ENST00000605457 GLRX3O76003 335 aaKnown RBP17.24■□□□□ 0.35
TUBE1-211ENST00000605457 PLCG2P16885 1265 aa17.24■□□□□ 0.35
TUBE1-211ENST00000605457 ECE1P42892 770 aa17.24■□□□□ 0.35
TUBE1-211ENST00000605457 RGMBQ6NW40 437 aa17.24■□□□□ 0.35
TUBE1-211ENST00000605457 ZFPM1Q8IX07 1006 aa17.24■□□□□ 0.35
TUBE1-211ENST00000605457 JMYQ8N9B5 988 aa17.24■□□□□ 0.35
TUBE1-211ENST00000605457 ANGEL1Q9UNK9 670 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms