RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	ZNF765	Q7L2R6	523 aa		7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	TP53INP2	Q8IXH6	220 aa		7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	CCER1	Q8TC90	406 aa	Predicted RBP	7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	FMNL2	Q96PY5	1086 aa		7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	LGR6	Q9HBX8	967 aa		7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	BSDC1	Q9NW68	430 aa	Predicted RBP	7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	TRAK1	Q9UPV9	953 aa		7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	IGHA2	P01877	340 aa		7.47	□□□□□ -1.21
LAMA4-222	ENST00000604740	GRM2	Q14416	872 aa		7.47	□□□□□ -1.21
LAMA4-222	ENST00000604740	DMRTB1	Q96MA1	342 aa		7.47	□□□□□ -1.21
LAMA4-222	ENST00000604740	FBXL18	Q96ME1	805 aa		7.47	□□□□□ -1.21
LAMA4-222	ENST00000604740	CSRNP1	Q96S65	589 aa		7.47	□□□□□ -1.21
LAMA4-222	ENST00000604740	ZC3H12C	Q9C0D7	883 aa	Known RBP	7.47	□□□□□ -1.21
LAMA4-222	ENST00000604740	DYNC1LI2	O43237	492 aa	Predicted RBP	7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	LIG1	P18858	919 aa		7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	FAAP100	Q0VG06	881 aa		7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	FLCN	Q8NFG4	579 aa		7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	EPS8L3	Q8TE67	593 aa	Known RBP	7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	GSX1	Q9H4S2	264 aa	Predicted RBP	7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	PPP1R9A	Q9ULJ8	1098 aa		7.46	□□□□□ -1.22
LAMA4-222	ENST00000604740	DTHD1	Q6ZMT9	781 aa		7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	GLIS3	Q8NEA6	775 aa		7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	ALKBH8	Q96BT7	664 aa	Known RBP	7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	WDR89	Q96FK6	387 aa	Predicted RBP	7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	RBCK1	Q9BYM8	510 aa		7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	CCDC86	Q9H6F5	360 aa	Known RBP	7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	PIDD1	Q9HB75	910 aa		7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	C1GALT1	Q9NS00	363 aa		7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	GPN3	Q9UHW5	284 aa	Predicted RBP	7.45	□□□□□ -1.22
LAMA4-222	ENST00000604740	TMPRSS2	O15393	492 aa		7.44	□□□□□ -1.22
LAMA4-222	ENST00000604740	FCGRT	P55899	365 aa		7.44	□□□□□ -1.22
LAMA4-222	ENST00000604740	PDE4C	Q08493	712 aa		7.44	□□□□□ -1.22
LAMA4-222	ENST00000604740	SEZ6L2	Q6UXD5	910 aa		7.44	□□□□□ -1.22
LAMA4-222	ENST00000604740	NFXL1	Q6ZNB6	911 aa		7.44	□□□□□ -1.22
LAMA4-222	ENST00000604740	SUPT5H	O00267	1087 aa	Known RBP	7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	PI16	Q6UXB8	463 aa		7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	ATXN3L	Q9H3M9	355 aa		7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	NLRP2	Q9NX02	1062 aa		7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	CRIM1	Q9NZV1	1036 aa		7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	BIN2	Q9UBW5	565 aa	Predicted RBP	7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	SYNGAP1	Q96PV0	1343 aa		7.43	□□□□□ -1.22
LAMA4-222	ENST00000604740	SOWAHD	A6NJG2	315 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	ZNF862	O60290	1169 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	GSTP1	P09211	210 aa	Known RBP	7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	SLFN14	P0C7P3	912 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	ID3	Q02535	119 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	PPP2R3A	Q06190	1150 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	OGFOD3	Q6PK18	319 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	TMC7	Q7Z402	723 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	FANCD2OS	Q96PS1	177 aa		7.42	□□□□□ -1.22
LAMA4-222	ENST00000604740	CDK5R2	Q13319	367 aa		7.41	□□□□□ -1.22
LAMA4-222	ENST00000604740	CYP27C1	Q4G0S4	372 aa		7.41	□□□□□ -1.22
LAMA4-222	ENST00000604740	AGBL5	Q8NDL9	886 aa		7.41	□□□□□ -1.22
LAMA4-222	ENST00000604740	PAK6	Q9NQU5	681 aa	Predicted RBP	7.41	□□□□□ -1.22
LAMA4-222	ENST00000604740	TMEM39A	Q9NV64	488 aa		7.41	□□□□□ -1.22
LAMA4-222	ENST00000604740	PPP4R2	Q9NY27	417 aa		7.41	□□□□□ -1.22
LAMA4-222	ENST00000604740	FAM87A	P0C7U9	286 aa		7.4	□□□□□ -1.22
LAMA4-222	ENST00000604740	KIF4B	Q2VIQ3	1234 aa		7.4	□□□□□ -1.22
LAMA4-222	ENST00000604740	KCNB2	Q92953	911 aa		7.4	□□□□□ -1.22
LAMA4-222	ENST00000604740	BCO2	Q9BYV7	579 aa		7.4	□□□□□ -1.22
LAMA4-222	ENST00000604740	KRT82	Q9NSB4	513 aa		7.4	□□□□□ -1.22
LAMA4-222	ENST00000604740	BTBD11	A6QL63	1104 aa		7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	RNGTT	O60942	597 aa	Known RBP	7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	YBX3	P16989	372 aa	Known RBP eCLIP	7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	TTLL4	Q14679	1199 aa		7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	CBLL1	Q75N03	491 aa		7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	DCTN4	Q9UJW0	460 aa		7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	SLC5A6	Q9Y289	635 aa		7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	AKAP2	Q9Y2D5	859 aa		7.39	□□□□□ -1.23
LAMA4-222	ENST00000604740	PNMA6F	A0A0J9YX94	578 aa		7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	XRCC5	P13010	732 aa	Known RBP	7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	HCLS1	P14317	486 aa	Predicted RBP	7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	COL19A1	Q14993	1142 aa		7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	SULF2	Q8IWU5	870 aa		7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	DISC1	Q9NRI5	854 aa		7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	PCDHGC5	Q9Y5F6	944 aa		7.38	□□□□□ -1.23
LAMA4-222	ENST00000604740	MAPK1	P28482	360 aa		7.37	□□□□□ -1.23
LAMA4-222	ENST00000604740	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
LAMA4-222	ENST00000604740	NXPE4	Q6UWF7	544 aa		7.37	□□□□□ -1.23
LAMA4-222	ENST00000604740	PDZD3	Q86UT5	571 aa		7.37	□□□□□ -1.23
LAMA4-222	ENST00000604740	FAM181A	Q8N9Y4	354 aa		7.37	□□□□□ -1.23
LAMA4-222	ENST00000604740	PLCL1	Q15111	1095 aa		7.36	□□□□□ -1.23
LAMA4-222	ENST00000604740	MAP1S	Q66K74	1059 aa	Predicted RBP	7.36	□□□□□ -1.23
LAMA4-222	ENST00000604740	STK11IP	Q8N1F8	1099 aa		7.36	□□□□□ -1.23
LAMA4-222	ENST00000604740	PLD6	Q8N2A8	252 aa	Known RBP	7.36	□□□□□ -1.23
LAMA4-222	ENST00000604740	STK35	Q8TDR2	534 aa		7.36	□□□□□ -1.23
LAMA4-222	ENST00000604740	SSU72	Q9NP77	194 aa	Known RBP	7.36	□□□□□ -1.23
LAMA4-222	ENST00000604740	PLCB3	Q01970	1234 aa		7.35	□□□□□ -1.23
LAMA4-222	ENST00000604740	ARHGAP27	Q6ZUM4	889 aa		7.35	□□□□□ -1.23
LAMA4-222	ENST00000604740	NETO1	Q8TDF5	533 aa		7.35	□□□□□ -1.23
LAMA4-222	ENST00000604740	ASIC4	Q96FT7	647 aa		7.35	□□□□□ -1.23
LAMA4-222	ENST00000604740	CBX8	Q9HC52	389 aa		7.35	□□□□□ -1.23
LAMA4-222	ENST00000604740	PCOLCE2	Q9UKZ9	415 aa		7.35	□□□□□ -1.23
LAMA4-222	ENST00000604740	GNE	Q9Y223	722 aa	Known RBP	7.35	□□□□□ -1.23

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