RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 INO80Q9ULG1 1556 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 PPP1R14CQ8TAE6 165 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 LEO1Q8WVC0 666 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 MAML3Q96JK9 1138 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 KDM4CQ9H3R0 1056 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 GOLGA6CA6NDK9 693 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 PRR23AA6NEV1 266 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 GOLGA6DP0CG33 693 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 SRRM1Q8IYB3 904 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 SPZ1Q9BXG8 430 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 NACA2Q9H009 215 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 GOLGA6AQ9NYA3 693 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 NUP88Q99567 741 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 NAP1L4Q99733 375 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 GPC4O75487 556 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 NAA16Q6N069 864 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 CNOT10Q9H9A5 744 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 TTF2Q9UNY4 1162 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 WIZO95785 1651 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 RAB3GAP1Q15042 981 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 BCAS4Q8TDM0 211 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 ERCC5P28715 1186 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 COG7P83436 770 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 MICAL1Q8TDZ2 1067 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 HNRNPLLQ8WVV9 542 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 TMX3Q96JJ7 454 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 RPRD2Q5VT52 1461 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 ITIH3Q06033 890 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 VIPAS39Q9H9C1 493 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 HNRNPRO43390 633 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 GSTA2P09210 222 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 MCMDC2Q4G0Z9 681 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 TMEM57Q8N5G2 664 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 KDM1AO60341 852 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 RPSAP08865 295 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 HMG20BQ9P0W2 317 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 BNC1Q01954 994 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 SYTL4Q96C24 671 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 HAUS4Q9H6D7 363 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 SYF2O95926 243 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 RARSP54136 660 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 ENAHQ8N8S7 591 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 CREB3O43889 395 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 IRAK1P51617 712 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 RASGRF1Q13972 1273 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 TTF1Q15361 905 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 GIMAP6Q6P9H5 292 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 ASCC2Q9H1I8 757 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 NRDE2Q9H7Z3 1164 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 EPRSP07814 1512 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 PLEKHG2Q9H7P9 1386 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 DDI1Q8WTU0 396 aa3.79□□□□□ -1.8
NEB-218ENST00000603639 OSBPL5Q9H0X9 879 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 COPB1P53618 953 aaKnown RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 RNF41Q9H4P4 317 aaPredicted RBP3.79□□□□□ -1.8
NEB-218ENST00000603639 CTAGE3PQ8IX95 158 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 ANGPTL3Q9Y5C1 460 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 ARID3CA6NKF2 412 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 SUN1O94901 812 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 BRAPQ7Z569 592 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 SLF2Q8IX21 1173 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 PRPF31Q8WWY3 499 aaKnown RBP3.78□□□□□ -1.8
NEB-218ENST00000603639 UTP6Q9NYH9 597 aaKnown RBP3.78□□□□□ -1.8
NEB-218ENST00000603639 ADCY10Q96PN6 1610 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 AKR1B10O60218 316 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 CXorf56Q9H5V9 222 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 FGFR1OP2Q9NVK5 253 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 CETN3O15182 167 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 BICDL1Q6ZP65 573 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 ZBTB40Q9NUA8 1239 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 GSTTP1A0A1W2PQM5 241 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 SYKP43405 635 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 ROPN1BQ9BZX4 212 aaPredicted RBP3.78□□□□□ -1.8
NEB-218ENST00000603639 ROPN1Q9HAT0 212 aaPredicted RBP3.78□□□□□ -1.8
NEB-218ENST00000603639 VPS18Q9P253 973 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 CARMIL1Q5VZK9 1371 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 LRRC9Q6ZRR7 1453 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 THAP12O43422 761 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 PSMA4P25789 261 aaKnown RBP3.78□□□□□ -1.8
NEB-218ENST00000603639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.78□□□□□ -1.8
NEB-218ENST00000603639 BABAM1Q9NWV8 329 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 NUB1Q9Y5A7 615 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 SLC12A7Q9Y666 1083 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 SYCE3A1L190 88 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 OPHN1O60890 802 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 CCT5P48643 541 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 RPS6KA2Q15349 733 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 TXLNGQ9NUQ3 528 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 BAIAP2L1Q9UHR4 511 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 CFAP73A6NFT4 308 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 BCAR3O75815 825 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 FERMT2Q96AC1 680 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 RILPQ96NA2 401 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 ASXL1Q8IXJ9 1541 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 TCP1P17987 556 aaKnown RBP3.78□□□□□ -1.8
NEB-218ENST00000603639 AARSP49588 968 aaKnown RBP eCLIP3.78□□□□□ -1.8
NEB-218ENST00000603639 SECISBP2LQ93073 1101 aaKnown RBP3.78□□□□□ -1.8
NEB-218ENST00000603639 TMEM60Q9H2L4 133 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 MACROD2A1Z1Q3 448 aa3.78□□□□□ -1.8
NEB-218ENST00000603639 GOLGA8AA7E2F4 631 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms