RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TRIM27P14373 513 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 SP3Q02447 781 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 CDC42EP5Q6NZY7 148 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 MIGA2Q7L4E1 593 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 FRAT1Q92837 279 aaPredicted RBP26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 DENND2AQ9ULE3 1009 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 TNNQ9UQP3 1299 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 SNCAIPQ9Y6H5 919 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 SPDYE5A6NIY4 337 aa26.32■■□□□ 1.8
PPFIA3-209ENST00000602783 IPO8O15397 1037 aaKnown RBP26.32■■□□□ 1.8
PPFIA3-209ENST00000602783 GNAI3P08754 354 aa26.32■■□□□ 1.8
PPFIA3-209ENST00000602783 DCAF15Q66K64 600 aa26.32■■□□□ 1.8
PPFIA3-209ENST00000602783 ERO1BQ86YB8 467 aa26.32■■□□□ 1.8
PPFIA3-209ENST00000602783 FAM151AQ8WW52 585 aa26.32■■□□□ 1.8
PPFIA3-209ENST00000602783 SEMA3EO15041 775 aa26.31■■□□□ 1.8
PPFIA3-209ENST00000602783 ADORA1P30542 326 aa26.31■■□□□ 1.8
PPFIA3-209ENST00000602783 TCP10Q12799 353 aa26.31■■□□□ 1.8
PPFIA3-209ENST00000602783 TAF1CQ15572 869 aaPredicted RBP26.31■■□□□ 1.8
PPFIA3-209ENST00000602783 ATF7IPQ6VMQ6 1270 aa26.31■■□□□ 1.8
PPFIA3-209ENST00000602783 ZNF341Q9BYN7 854 aa26.31■■□□□ 1.8
PPFIA3-209ENST00000602783 TIMM10P62072 90 aa26.3■■□□□ 1.8
PPFIA3-209ENST00000602783 CCDC102BQ68D86 513 aa26.3■■□□□ 1.8
PPFIA3-209ENST00000602783 FAM43AQ8N2R8 423 aa26.3■■□□□ 1.8
PPFIA3-209ENST00000602783 EFCC1Q9HA90 598 aa26.3■■□□□ 1.8
PPFIA3-209ENST00000602783 ZFYVE28Q9HCC9 887 aa26.3■■□□□ 1.8
PPFIA3-209ENST00000602783 SALL1Q9NSC2 1324 aa26.3■■□□□ 1.8
PPFIA3-209ENST00000602783 RPAP1Q9BWH6 1393 aaPredicted RBP26.3■■□□□ 1.8
PPFIA3-209ENST00000602783 SRGAP3O43295 1099 aa26.29■■□□□ 1.8
PPFIA3-209ENST00000602783 USP40Q9NVE5 1235 aa26.29■■□□□ 1.8
PPFIA3-209ENST00000602783 PTPN22Q9Y2R2 807 aa26.29■■□□□ 1.8
PPFIA3-209ENST00000602783 IRF6O14896 467 aa26.28■■□□□ 1.8
PPFIA3-209ENST00000602783 CETPP11597 493 aa26.28■■□□□ 1.8
PPFIA3-209ENST00000602783 NFIAQ12857 509 aa26.28■■□□□ 1.8
PPFIA3-209ENST00000602783 CLUAP1Q96AJ1 413 aa26.28■■□□□ 1.8
PPFIA3-209ENST00000602783 INPP5BP32019 993 aa26.27■■□□□ 1.8
PPFIA3-209ENST00000602783 ZBED9Q6R2W3 1325 aa26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 CAP1Q01518 475 aa26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 TFCP2Q12800 502 aa26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 PPIL2Q13356 520 aa26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 SNAPC2Q13487 334 aa26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 ZGPATQ8N5A5 531 aaKnown RBP26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 FAM198AQ9UFP1 575 aa26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 AKAP2Q9Y2D5 859 aa26.26■■□□□ 1.79
PPFIA3-209ENST00000602783 A0A1B0GUL7 405 aa26.25■■□□□ 1.79
PPFIA3-209ENST00000602783 ZBTB22O15209 634 aa26.25■■□□□ 1.79
PPFIA3-209ENST00000602783 WDHD1O75717 1129 aaPredicted RBP26.25■■□□□ 1.79
PPFIA3-209ENST00000602783 MTX1Q13505 466 aa26.25■■□□□ 1.79
PPFIA3-209ENST00000602783 RASGRF1Q13972 1273 aa26.25■■□□□ 1.79
PPFIA3-209ENST00000602783 ABCF2Q9UG63 623 aa26.25■■□□□ 1.79
PPFIA3-209ENST00000602783 AK9Q5TCS8 1911 aa26.25■■□□□ 1.79
PPFIA3-209ENST00000602783 BTBD19C9JJ37 291 aa26.24■■□□□ 1.79
PPFIA3-209ENST00000602783 PPATQ06203 517 aa26.24■■□□□ 1.79
PPFIA3-209ENST00000602783 ZKSCAN2Q63HK3 967 aa26.24■■□□□ 1.79
PPFIA3-209ENST00000602783 XAGE2Q96GT9 111 aa26.24■■□□□ 1.79
PPFIA3-209ENST00000602783 ARHGEF6Q15052 776 aa26.23■■□□□ 1.79
PPFIA3-209ENST00000602783 ZFPM1Q8IX07 1006 aa26.23■■□□□ 1.79
PPFIA3-209ENST00000602783 ZNF112Q9UJU3 913 aa26.23■■□□□ 1.79
PPFIA3-209ENST00000602783 HTTP42858 3142 aa26.22■■□□□ 1.79
PPFIA3-209ENST00000602783 GNAI2P04899 355 aa26.22■■□□□ 1.79
PPFIA3-209ENST00000602783 DZIP1Q86YF9 867 aaKnown RBP26.22■■□□□ 1.79
PPFIA3-209ENST00000602783 TMEM57Q8N5G2 664 aa26.22■■□□□ 1.79
PPFIA3-209ENST00000602783 NEUROD6Q96NK8 337 aa26.22■■□□□ 1.79
PPFIA3-209ENST00000602783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.22■■□□□ 1.79
PPFIA3-209ENST00000602783 TLR2O60603 784 aa26.21■■□□□ 1.79
PPFIA3-209ENST00000602783 MVPQ14764 893 aaKnown RBP26.21■■□□□ 1.79
PPFIA3-209ENST00000602783 SPTY2D1Q68D10 685 aaPredicted RBP26.21■■□□□ 1.79
PPFIA3-209ENST00000602783 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.21■■□□□ 1.79
PPFIA3-209ENST00000602783 ZCCHC17Q9NP64 241 aaKnown RBP26.21■■□□□ 1.79
PPFIA3-209ENST00000602783 GAKO14976 1311 aa26.2■■□□□ 1.79
PPFIA3-209ENST00000602783 PDS5AQ29RF7 1337 aaKnown RBP26.2■■□□□ 1.79
PPFIA3-209ENST00000602783 RGS3P49796 1198 aa26.2■■□□□ 1.78
PPFIA3-209ENST00000602783 SLF2Q8IX21 1173 aa26.2■■□□□ 1.78
PPFIA3-209ENST00000602783 IDI2Q9BXS1 227 aa26.2■■□□□ 1.78
PPFIA3-209ENST00000602783 MYH2Q9UKX2 1941 aa26.19■■□□□ 1.78
PPFIA3-209ENST00000602783 PNMA6EA0A0J9YXQ4 647 aa26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 POTEFA5A3E0 1075 aa26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 ENTPD3O75355 529 aa26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 G3BP1Q13283 466 aaKnown RBP eCLIP26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 NOL9Q5SY16 702 aaKnown RBP26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 GORABQ5T7V8 394 aa26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 ARMC5Q96C12 935 aa26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 FAM163AQ96GL9 167 aaPredicted RBP26.18■■□□□ 1.78
PPFIA3-209ENST00000602783 KIAA0100Q14667 2235 aaKnown RBP26.17■■□□□ 1.78
PPFIA3-209ENST00000602783 ERICH6Q7L0X2 663 aa26.17■■□□□ 1.78
PPFIA3-209ENST00000602783 ZSCAN29Q8IWY8 852 aaPredicted RBP26.17■■□□□ 1.78
PPFIA3-209ENST00000602783 KCNH4Q9UQ05 1017 aa26.17■■□□□ 1.78
PPFIA3-209ENST00000602783 CENPFP49454 3210 aa26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 SLC34A2O95436 690 aa26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 BTDP43251 543 aa26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 KIF22Q14807 665 aa26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 PRPF38BQ5VTL8 546 aaKnown RBP26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 ANKRD23Q86SG2 305 aa26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 FTSJ3Q8IY81 847 aaKnown RBP26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 HMG20BQ9P0W2 317 aa26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 PTCH2Q9Y6C5 1203 aa26.16■■□□□ 1.78
PPFIA3-209ENST00000602783 MECOMQ03112 1051 aa26.15■■□□□ 1.78
PPFIA3-209ENST00000602783 SH3BP5LQ7L8J4 393 aa26.15■■□□□ 1.78
PPFIA3-209ENST00000602783 ARHGAP39Q9C0H5 1083 aa26.15■■□□□ 1.78
PPFIA3-209ENST00000602783 DDX4Q9NQI0 724 aaKnown RBP26.15■■□□□ 1.78
PPFIA3-209ENST00000602783 MROH7-TTC4A0A0A0MT08 1334 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms