RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 LUC7L3O95232 432 aaKnown RBP9.75□□□□□ -0.85
CSMD1-216ENST00000602557 ESR2Q92731 530 aa9.75□□□□□ -0.85
CSMD1-216ENST00000602557 SLC4A4Q9Y6R1 1079 aa9.75□□□□□ -0.85
CSMD1-216ENST00000602557 PSMA7O14818 248 aa9.75□□□□□ -0.85
CSMD1-216ENST00000602557 IRX5P78411 483 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-216ENST00000602557 ATICP31939 592 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CBX8Q9HC52 389 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 RPRD2Q5VT52 1461 aaKnown RBP9.74□□□□□ -0.85
CSMD1-216ENST00000602557 PLB1Q6P1J6 1458 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 hCG_2014768A0A024R1R8 64 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 KIAA1524Q8TCG1 905 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 DHX58Q96C10 678 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 KRT86O43790 486 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 BMP15O95972 392 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CABS1Q96KC9 395 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 NUF2Q9BZD4 464 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 PCDHB15Q9Y5E8 787 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 GSTO1P78417 241 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CCDC62Q6P9F0 684 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 GPIHBP1Q8IV16 184 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CYP7A1P22680 504 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 UAP1Q16222 522 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-216ENST00000602557 PPP1R7Q15435 360 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 ZNF500O60304 480 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-216ENST00000602557 GADD45BO75293 160 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-216ENST00000602557 NBPF7P0C2Y1 421 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-216ENST00000602557 GUCY2FP51841 1108 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 KIF5AQ12840 1032 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CXorf38Q8TB03 319 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 SSX2IPQ9Y2D8 614 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CHST3Q7LGC8 479 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CNNM2Q9H8M5 875 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 TUBB4BP68371 445 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 IL16Q14005 1332 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 ANKRD36BQ8N2N9 1353 aa9.74□□□□□ -0.85
CSMD1-216ENST00000602557 DPH6Q7L8W6 267 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 PHLDB2Q86SQ0 1253 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 LRRD1A4D1F6 860 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 SPTLC2O15270 562 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 POLE2P56282 527 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 NMIQ13287 307 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-216ENST00000602557 ANKRD13DQ6ZTN6 518 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 AKR1B15C9JRZ8 316 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-216ENST00000602557 TRIM31Q9BZY9 425 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 CTNND2Q9UQB3 1225 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 F8W031 263 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-216ENST00000602557 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 CABP5Q9NP86 173 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 SPAG1Q07617 926 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 VSIG1Q86XK7 387 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 XAGE3Q8WTP9 111 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 TNNC1P63316 161 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 PRR16Q569H4 304 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 FYB2Q5VWT5 728 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 LRRC45Q96CN5 670 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 PAG1Q9NWQ8 432 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 RAPGEF6Q8TEU7 1601 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 BAG2O95816 211 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 HSPA1LP34931 641 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 C8orf74Q6P047 294 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 EPSTI1Q96J88 318 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 AMOTL2Q9Y2J4 779 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 SNRPA1P09661 255 aaKnown RBP9.73□□□□□ -0.85
CSMD1-216ENST00000602557 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
CSMD1-216ENST00000602557 POLD1P28340 1107 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 PRPHP41219 470 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 PRPF38AQ8NAV1 312 aaKnown RBP9.72□□□□□ -0.85
CSMD1-216ENST00000602557 CAPS2Q9BXY5 557 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 SBNO2Q9Y2G9 1366 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 RAD50Q92878 1312 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 LDHCP07864 332 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 SECISBP2LQ93073 1101 aaKnown RBP9.72□□□□□ -0.85
CSMD1-216ENST00000602557 PSMB7Q99436 277 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 TRIM75PA6NK02 468 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 KRT83P78385 493 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 CFAP157Q5JU67 520 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 CD109Q6YHK3 1445 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 CA8P35219 290 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 ZNF445P59923 1031 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 ATP2B3Q16720 1220 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 RASIP1Q5U651 963 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 HIP1RO75146 1068 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 MCM7P33993 719 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 ANKRD24Q8TF21 1146 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 CCDC42Q96M95 316 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 IFT88Q13099 833 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 TEX11Q8IYF3 940 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 USP37Q86T82 979 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 NGLY1Q96IV0 654 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 KDM5AP29375 1690 aaKnown RBP9.72□□□□□ -0.85
CSMD1-216ENST00000602557 TNNI2P48788 182 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 PLS1Q14651 629 aa9.72□□□□□ -0.85
CSMD1-216ENST00000602557 LRMPQ12912 555 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 ZBTB17Q13105 803 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 PPFIA1Q13136 1202 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 AKNAD1Q5T1N1 836 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 VPS52Q8N1B4 723 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms