RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 TBC1D9Q6ZT07 1266 aa21.5■■□□□ 1.03
IRF3-230ENST00000601809 ARMC9Q7Z3E5 817 aa21.5■■□□□ 1.03
IRF3-230ENST00000601809 NSUN4Q96CB9 384 aaKnown RBP21.5■■□□□ 1.03
IRF3-230ENST00000601809 ABCF2Q9UG63 623 aa21.5■■□□□ 1.03
IRF3-230ENST00000601809 ANGEL1Q9UNK9 670 aaKnown RBP21.5■■□□□ 1.03
IRF3-230ENST00000601809 DOCK2Q92608 1830 aa21.5■■□□□ 1.03
IRF3-230ENST00000601809 HMMRO75330 724 aa21.49■■□□□ 1.03
IRF3-230ENST00000601809 HSPA8P11142 646 aaKnown RBP21.49■■□□□ 1.03
IRF3-230ENST00000601809 KIF23Q02241 960 aaPredicted RBP21.49■■□□□ 1.03
IRF3-230ENST00000601809 NFIAQ12857 509 aa21.49■■□□□ 1.03
IRF3-230ENST00000601809 COL13A1Q5TAT6 717 aaPredicted RBP21.49■■□□□ 1.03
IRF3-230ENST00000601809 SPTY2D1Q68D10 685 aaPredicted RBP21.49■■□□□ 1.03
IRF3-230ENST00000601809 FAM198AQ9UFP1 575 aa21.49■■□□□ 1.03
IRF3-230ENST00000601809 UNCXA6NJT0 531 aa21.48■■□□□ 1.03
IRF3-230ENST00000601809 CYP2E1P05181 493 aaPredicted RBP21.48■■□□□ 1.03
IRF3-230ENST00000601809 TNNI2P48788 182 aa21.48■■□□□ 1.03
IRF3-230ENST00000601809 TTLL12Q14166 644 aaPredicted RBP21.48■■□□□ 1.03
IRF3-230ENST00000601809 CCDC158Q5M9N0 1113 aa21.48■■□□□ 1.03
IRF3-230ENST00000601809 TTC39AQ5SRH9 613 aa21.48■■□□□ 1.03
IRF3-230ENST00000601809 ERICH6Q7L0X2 663 aa21.48■■□□□ 1.03
IRF3-230ENST00000601809 KIF1BPQ96EK5 621 aa21.48■■□□□ 1.03
IRF3-230ENST00000601809 MROH7-TTC4A0A0A0MT08 1334 aa21.48■■□□□ 1.03
IRF3-230ENST00000601809 GPR75-ASB3A0A0A6YYF3 556 aa21.47■■□□□ 1.03
IRF3-230ENST00000601809 PPP1R12BO60237 982 aaPredicted RBP21.47■■□□□ 1.03
IRF3-230ENST00000601809 CTCFP49711 727 aaPredicted RBP21.47■■□□□ 1.03
IRF3-230ENST00000601809 FAM151AQ8WW52 585 aa21.47■■□□□ 1.03
IRF3-230ENST00000601809 CLMNQ96JQ2 1002 aa21.47■■□□□ 1.03
IRF3-230ENST00000601809 CSRNP1Q96S65 589 aa21.47■■□□□ 1.03
IRF3-230ENST00000601809 IDI2Q9BXS1 227 aa21.47■■□□□ 1.03
IRF3-230ENST00000601809 IL1RAPL2Q9NP60 686 aa21.47■■□□□ 1.03
IRF3-230ENST00000601809 SNRKQ9NRH2 765 aa21.47■■□□□ 1.03
IRF3-230ENST00000601809 RAB11FIP3O75154 756 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 ZAP70P43403 619 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 RHBDL3P58872 404 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 AACSQ86V21 672 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 DZIP1Q86YF9 867 aaKnown RBP21.46■■□□□ 1.03
IRF3-230ENST00000601809 AIDAQ96BJ3 306 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 PRDM10Q9NQV6 1147 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 TMOD2Q9NZR1 351 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 ATRNL1Q5VV63 1379 aa21.46■■□□□ 1.03
IRF3-230ENST00000601809 USP40Q9NVE5 1235 aa21.45■■□□□ 1.02
IRF3-230ENST00000601809 CDK5RAP2Q96SN8 1893 aa21.44■■□□□ 1.02
IRF3-230ENST00000601809 WDHD1O75717 1129 aaPredicted RBP21.44■■□□□ 1.02
IRF3-230ENST00000601809 BTDP43251 543 aa21.44■■□□□ 1.02
IRF3-230ENST00000601809 SPRYD7Q5W111 196 aa21.44■■□□□ 1.02
IRF3-230ENST00000601809 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.44■■□□□ 1.02
IRF3-230ENST00000601809 ZFPM1Q8IX07 1006 aa21.44■■□□□ 1.02
IRF3-230ENST00000601809 SLF2Q8IX21 1173 aa21.44■■□□□ 1.02
IRF3-230ENST00000601809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.44■■□□□ 1.02
IRF3-230ENST00000601809 PIH1D3Q9NQM4 214 aaKnown RBP21.44■■□□□ 1.02
IRF3-230ENST00000601809 PCDHB15Q9Y5E8 787 aa21.44■■□□□ 1.02
IRF3-230ENST00000601809 CA12O43570 354 aa21.43■■□□□ 1.02
IRF3-230ENST00000601809 IGSF3O75054 1194 aa21.43■■□□□ 1.02
IRF3-230ENST00000601809 GJA5P36382 358 aa21.43■■□□□ 1.02
IRF3-230ENST00000601809 IREB2P48200 963 aaKnown RBP21.43■■□□□ 1.02
IRF3-230ENST00000601809 LBX1P52954 281 aa21.43■■□□□ 1.02
IRF3-230ENST00000601809 DDX4Q9NQI0 724 aaKnown RBP21.43■■□□□ 1.02
IRF3-230ENST00000601809 ENTPD3O75355 529 aa21.42■■□□□ 1.02
IRF3-230ENST00000601809 FOCADQ5VW36 1801 aa21.42■■□□□ 1.02
IRF3-230ENST00000601809 SH3BP5LQ7L8J4 393 aa21.42■■□□□ 1.02
IRF3-230ENST00000601809 REM2Q8IYK8 340 aaPredicted RBP21.42■■□□□ 1.02
IRF3-230ENST00000601809 ANKRD13AQ8IZ07 590 aa21.42■■□□□ 1.02
IRF3-230ENST00000601809 CLASRPQ8N2M8 674 aaKnown RBP21.42■■□□□ 1.02
IRF3-230ENST00000601809 DCTPP1Q9H773 170 aa21.42■■□□□ 1.02
IRF3-230ENST00000601809 NPM3O75607 178 aaKnown RBP21.41■■□□□ 1.02
IRF3-230ENST00000601809 TM4SF4P48230 202 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 RGS3P49796 1198 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 GSTO1P78417 241 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 ADGRA1Q86SQ6 560 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.41■■□□□ 1.02
IRF3-230ENST00000601809 WNK4Q96J92 1243 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 SAGE1Q9NXZ1 904 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 RAI14Q9P0K7 980 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 LRP2BPQ9P2M1 347 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 TSKSQ9UJT2 592 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 NDUFB9Q9Y6M9 179 aa21.41■■□□□ 1.02
IRF3-230ENST00000601809 APBB1O00213 710 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 LDHCP07864 332 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 ZBTB48P10074 688 aaPredicted RBP21.4■■□□□ 1.02
IRF3-230ENST00000601809 MAP3K10Q02779 954 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 TCP10Q12799 353 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 SLC10A4Q96EP9 437 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 CRBNQ96SW2 442 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 ANTXR1Q9H6X2 564 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 RNF186Q9NXI6 227 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 ZNF112Q9UJU3 913 aa21.4■■□□□ 1.02
IRF3-230ENST00000601809 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.02
IRF3-230ENST00000601809 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
IRF3-230ENST00000601809 MAP3K9P80192 1104 aa21.39■■□□□ 1.01
IRF3-230ENST00000601809 VGLL4Q14135 290 aa21.39■■□□□ 1.01
IRF3-230ENST00000601809 BEGAINQ9BUH8 593 aa21.39■■□□□ 1.01
IRF3-230ENST00000601809 SIPA1L1O43166 1804 aa21.39■■□□□ 1.01
IRF3-230ENST00000601809 AK9Q5TCS8 1911 aa21.38■■□□□ 1.01
IRF3-230ENST00000601809 PPP4CP60510 307 aa21.38■■□□□ 1.01
IRF3-230ENST00000601809 MKRN3Q13064 507 aaKnown RBP21.38■■□□□ 1.01
IRF3-230ENST00000601809 SNCAIPQ9Y6H5 919 aa21.38■■□□□ 1.01
IRF3-230ENST00000601809 DDTLA6NHG4 134 aaPredicted RBP21.37■■□□□ 1.01
IRF3-230ENST00000601809 NAA16Q6N069 864 aaPredicted RBP21.37■■□□□ 1.01
IRF3-230ENST00000601809 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
IRF3-230ENST00000601809 HOOK2Q96ED9 719 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms