RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 ZBTB48P10074 688 aaPredicted RBP12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 MFSD14BQ5SR56 506 aa12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 SLC4A10Q6U841 1118 aa12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 SLC10A4Q96EP9 437 aa12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 TTF2Q9UNY4 1162 aaKnown RBP12.78□□□□□ -0.36
MIA-RAB4B-201ENST00000600729 ALDH1L1O75891 902 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MRE11P49959 708 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 CACNB3P54284 484 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 INHBEP58166 350 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ZNF697Q5TEC3 545 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MS4A4AQ96JQ5 239 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 BICC1Q9H694 974 aaKnown RBP12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 TESPA1A2RU30 521 aaPredicted RBP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 TCP10L2B9ZVM9 353 aa12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 GJB1P08034 283 aa12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 HIBADHP31937 336 aaKnown RBP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 CRKP46108 304 aa12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 RBM5P52756 815 aaKnown RBP eCLIP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 FBXO33Q7Z6M2 555 aa12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MRPL50Q8N5N7 158 aaKnown RBP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 C9orf78Q9NZ63 289 aaPredicted RBP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ANKRD13AQ8IZ07 590 aa12.75□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 FAM9BQ8IZU0 186 aa12.75□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 OPTNQ96CV9 577 aa12.75□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 UBE2OQ9C0C9 1292 aaKnown RBP12.75□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MYO1BO43795 1136 aa12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 IREB2P48200 963 aaKnown RBP12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 VGLL4Q14135 290 aa12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MYLIPQ8WY64 445 aa12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 DNAH12Q6ZR08 3092 aa12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 DOCK2Q92608 1830 aa12.74□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 C5orf42Q9H799 3197 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 USP34Q70CQ2 3546 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 PTPRFP10586 1907 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 AK9Q5TCS8 1911 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 FGFR2P21802 821 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 RFX5P48382 616 aaPredicted RBP12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 CHAF1AQ13111 956 aaPredicted RBP12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 C7orf61Q8IZ16 206 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 LRFN3Q9BTN0 628 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MYO9BQ13459 2157 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 CHD8Q9HCK8 2581 aa12.73□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MROH5Q6ZUA9 1318 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ANP32CO43423 234 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 CCL5P13501 91 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MYH2Q9UKX2 1941 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 MGAMO43451 1857 aa12.72□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 PDE8BO95263 885 aa12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 FOSL2P15408 326 aa12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 SYN1P17600 705 aa12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 APOBEC3HQ6NTF7 200 aaKnown RBP12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 SSH1Q8WYL5 1049 aa12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 UHRF1Q96T88 793 aaPredicted RBP12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 ARHGAP39Q9C0H5 1083 aa12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 RNF208Q9H0X6 261 aa12.71□□□□□ -0.37
MIA-RAB4B-201ENST00000600729 EPG5Q9HCE0 2579 aa12.71□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 CCL15-CCL14A0A0B4J2E2 113 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 CTGFP29279 349 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 TNFAIP1Q13829 316 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 CCL15Q16663 113 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 METTL24Q5JXM2 366 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 OTUD7BQ6GQQ9 843 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 ATG9AQ7Z3C6 839 aa12.69□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 ZKSCAN4Q969J2 545 aaPredicted RBP12.69□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 ZDHHC15Q96MV8 337 aa12.69□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 XIRP2A4UGR9 3374 aa12.69□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 REV3LO60673 3130 aa12.69□□□□□ -0.38
MIA-RAB4B-201ENST00000600729 RPAP1Q9BWH6 1393 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms