RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 NEFLP07196 543 aa16.78■□□□□ 0.28
SNRPA-208ENST00000600456 BTDP43251 543 aa16.78■□□□□ 0.28
SNRPA-208ENST00000600456 FKBP1BP68106 108 aa16.78■□□□□ 0.28
SNRPA-208ENST00000600456 RASA3Q14644 834 aa16.78■□□□□ 0.28
SNRPA-208ENST00000600456 CHD1LQ86WJ1 897 aa16.78■□□□□ 0.28
SNRPA-208ENST00000600456 NOL10Q9BSC4 688 aaKnown RBP16.78■□□□□ 0.28
SNRPA-208ENST00000600456 USP40Q9NVE5 1235 aa16.78■□□□□ 0.28
SNRPA-208ENST00000600456 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 TCP10L2B9ZVM9 353 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
SNRPA-208ENST00000600456 BAG3O95817 575 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 DLK2Q6UY11 383 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 STAP2Q9UGK3 403 aa16.77■□□□□ 0.28
SNRPA-208ENST00000600456 SCAF8Q9UPN6 1271 aaKnown RBP16.77■□□□□ 0.28
SNRPA-208ENST00000600456 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
SNRPA-208ENST00000600456 PLCG2P16885 1265 aa16.76■□□□□ 0.27
SNRPA-208ENST00000600456 C2orf69Q8N8R5 385 aa16.76■□□□□ 0.27
SNRPA-208ENST00000600456 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
SNRPA-208ENST00000600456 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
SNRPA-208ENST00000600456 IDI2Q9BXS1 227 aa16.76■□□□□ 0.27
SNRPA-208ENST00000600456 LNPKQ9C0E8 428 aa16.76■□□□□ 0.27
SNRPA-208ENST00000600456 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNRPA-208ENST00000600456 GBA2Q9HCG7 927 aaPredicted RBP16.76■□□□□ 0.27
SNRPA-208ENST00000600456 ABT1Q9ULW3 272 aaKnown RBP16.76■□□□□ 0.27
SNRPA-208ENST00000600456 TLL2Q9Y6L7 1015 aa16.76■□□□□ 0.27
SNRPA-208ENST00000600456 POLR2AP24928 1970 aaKnown RBP16.76■□□□□ 0.27
SNRPA-208ENST00000600456 RPAP1Q9BWH6 1393 aaPredicted RBP16.76■□□□□ 0.27
SNRPA-208ENST00000600456 MYH2Q9UKX2 1941 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
SNRPA-208ENST00000600456 CYP7A1P22680 504 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 CACNB3P54284 484 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 RHBDL3P58872 404 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 PPP4CP60510 307 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 PRAMEF18Q5VWM3 479 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 FAM151AQ8WW52 585 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 HHIPL1Q96JK4 782 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 RFX7Q2KHR2 1363 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
SNRPA-208ENST00000600456 RASSF10A6NK89 507 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 ENTPD3O75355 529 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 PDE6AP16499 860 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 PDE1AP54750 535 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 HTRA3P83110 453 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 TSHZ3Q63HK5 1081 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 SAPCD2Q86UD0 394 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 HOOK2Q96ED9 719 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
SNRPA-208ENST00000600456 TEPSINQ96N21 525 aa16.74■□□□□ 0.27
SNRPA-208ENST00000600456 WDHD1O75717 1129 aaPredicted RBP16.73■□□□□ 0.27
SNRPA-208ENST00000600456 NFIAQ12857 509 aa16.73■□□□□ 0.27
SNRPA-208ENST00000600456 ADGRA1Q86SQ6 560 aa16.73■□□□□ 0.27
SNRPA-208ENST00000600456 KBTBD3Q8NAB2 608 aa16.73■□□□□ 0.27
SNRPA-208ENST00000600456 TMEM39BQ9GZU3 492 aa16.73■□□□□ 0.27
SNRPA-208ENST00000600456 FAM198AQ9UFP1 575 aa16.73■□□□□ 0.27
SNRPA-208ENST00000600456 PAPPA2Q9BXP8 1791 aa16.73■□□□□ 0.27
SNRPA-208ENST00000600456 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
SNRPA-208ENST00000600456 ADD2P35612 726 aa16.72■□□□□ 0.27
SNRPA-208ENST00000600456 RGS3P49796 1198 aa16.72■□□□□ 0.27
SNRPA-208ENST00000600456 DEFB115Q30KQ5 88 aa16.72■□□□□ 0.27
SNRPA-208ENST00000600456 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
SNRPA-208ENST00000600456 NBPF12Q5TAG4 269 aaPredicted RBP16.72■□□□□ 0.27
SNRPA-208ENST00000600456 AATFQ9NY61 560 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNRPA-208ENST00000600456 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
SNRPA-208ENST00000600456 TCRBV5S4A2TA0A5A2 114 aa16.71■□□□□ 0.27
SNRPA-208ENST00000600456 HUNKP57058 714 aa16.71■□□□□ 0.27
SNRPA-208ENST00000600456 UBE3CQ15386 1083 aa16.71■□□□□ 0.27
SNRPA-208ENST00000600456 ARMC9Q7Z3E5 817 aa16.71■□□□□ 0.27
SNRPA-208ENST00000600456 TEX11Q8IYF3 940 aa16.71■□□□□ 0.27
SNRPA-208ENST00000600456 DNAJC5GQ8N7S2 189 aa16.71■□□□□ 0.27
SNRPA-208ENST00000600456 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.27
SNRPA-208ENST00000600456 OSBPL3Q9H4L5 887 aa16.71■□□□□ 0.27
SNRPA-208ENST00000600456 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-208ENST00000600456 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-208ENST00000600456 TCP10Q12799 353 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-208ENST00000600456 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 CENPQQ7L2Z9 268 aaPredicted RBP16.7■□□□□ 0.26
SNRPA-208ENST00000600456 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 MIGA1Q8NAN2 632 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 KLRG1Q96E93 195 aa16.7■□□□□ 0.26
SNRPA-208ENST00000600456 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
SNRPA-208ENST00000600456 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
SNRPA-208ENST00000600456 ECE1P42892 770 aa16.69■□□□□ 0.26
SNRPA-208ENST00000600456 PICALMQ13492 652 aa16.69■□□□□ 0.26
SNRPA-208ENST00000600456 DCAF15Q66K64 600 aa16.69■□□□□ 0.26
SNRPA-208ENST00000600456 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
SNRPA-208ENST00000600456 CDAN1Q8IWY9 1227 aa16.69■□□□□ 0.26
SNRPA-208ENST00000600456 DDX4Q9NQI0 724 aaKnown RBP16.69■□□□□ 0.26
SNRPA-208ENST00000600456 MYO5AQ9Y4I1 1855 aaKnown RBP16.69■□□□□ 0.26
SNRPA-208ENST00000600456 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms