RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
USHBP1-210ENST00000600286 PRMT6Q96LA8 375 aaPredicted RBP20.15■□□□□ 0.82
USHBP1-210ENST00000600286 DAGLAQ9Y4D2 1042 aa20.15■□□□□ 0.82
USHBP1-210ENST00000600286 GAKO14976 1311 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 GPR75-ASB3A0A0A6YYF3 556 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 ADD2P35612 726 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 BTDP43251 543 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 TNNI2P48788 182 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 HIRAP54198 1017 aaPredicted RBP20.14■□□□□ 0.81
USHBP1-210ENST00000600286 TNFAIP1Q13829 316 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 NBPF9Q3BBW0 867 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 USP40Q9NVE5 1235 aa20.14■□□□□ 0.81
USHBP1-210ENST00000600286 ZNF532Q9HCE3 1301 aa20.13■□□□□ 0.81
USHBP1-210ENST00000600286 APOBEC3HQ6NTF7 200 aaKnown RBP20.13■□□□□ 0.81
USHBP1-210ENST00000600286 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
USHBP1-210ENST00000600286 SULF1Q8IWU6 871 aa20.13■□□□□ 0.81
USHBP1-210ENST00000600286 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
USHBP1-210ENST00000600286 TDRD3Q9H7E2 651 aaKnown RBP20.13■□□□□ 0.81
USHBP1-210ENST00000600286 VEZTQ9HBM0 779 aa20.13■□□□□ 0.81
USHBP1-210ENST00000600286 CREBZFQ9NS37 354 aa20.13■□□□□ 0.81
USHBP1-210ENST00000600286 AKAP11Q9UKA4 1901 aa20.12■□□□□ 0.81
USHBP1-210ENST00000600286 MAGEB6P1A0A0J9YX57 407 aa20.12■□□□□ 0.81
USHBP1-210ENST00000600286 EGFRP00533 1210 aa20.12■□□□□ 0.81
USHBP1-210ENST00000600286 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
USHBP1-210ENST00000600286 GGA3Q9NZ52 723 aa20.12■□□□□ 0.81
USHBP1-210ENST00000600286 ZNF70Q9UC06 446 aaPredicted RBP20.12■□□□□ 0.81
USHBP1-210ENST00000600286 TRPM7Q96QT4 1865 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 PITPNM2Q9BZ72 1349 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 PPP4CP60510 307 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 SPDYE2Q495Y8 402 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 CDC37L1Q7L3B6 337 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 AIDAQ96BJ3 306 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 DIAPH3Q9NSV4 1193 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 AATFQ9NY61 560 aaKnown RBP eCLIP20.11■□□□□ 0.81
USHBP1-210ENST00000600286 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
USHBP1-210ENST00000600286 CLRN2A0PK11 232 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 SDSP20132 328 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 FKBP1CQ5VVH2 108 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 CDC42EP5Q6NZY7 148 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 TEX11Q8IYF3 940 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 MIGA1Q8NAN2 632 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 ZNF384Q8TF68 577 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 APPBP2Q92624 585 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 PCDHAC2Q9Y5I4 1007 aa20.1■□□□□ 0.81
USHBP1-210ENST00000600286 BMP2KLQ5H9B9 411 aa20.09■□□□□ 0.81
USHBP1-210ENST00000600286 KRT26Q7Z3Y9 468 aa20.09■□□□□ 0.81
USHBP1-210ENST00000600286 DDRGK1Q96HY6 314 aa20.09■□□□□ 0.81
USHBP1-210ENST00000600286 CRNKL1Q9BZJ0 848 aaKnown RBP20.09■□□□□ 0.81
USHBP1-210ENST00000600286 RFX7Q2KHR2 1363 aa20.08■□□□□ 0.81
USHBP1-210ENST00000600286 TCRBV5S4A2TA0A5A2 114 aa20.08■□□□□ 0.81
USHBP1-210ENST00000600286 GSPT1P15170 499 aaKnown RBP20.08■□□□□ 0.81
USHBP1-210ENST00000600286 MFAP1P55081 439 aaKnown RBP20.08■□□□□ 0.81
USHBP1-210ENST00000600286 CASC1Q6TDU7 716 aa20.08■□□□□ 0.81
USHBP1-210ENST00000600286 RUFY2Q8WXA3 655 aa20.08■□□□□ 0.81
USHBP1-210ENST00000600286 PPP2R3BQ9Y5P8 575 aa20.08■□□□□ 0.81
USHBP1-210ENST00000600286 TCP10L2B9ZVM9 353 aa20.07■□□□□ 0.8
USHBP1-210ENST00000600286 USP5P45974 858 aa20.07■□□□□ 0.8
USHBP1-210ENST00000600286 MAP1SQ66K74 1059 aaPredicted RBP20.07■□□□□ 0.8
USHBP1-210ENST00000600286 HELLSQ9NRZ9 838 aa20.07■□□□□ 0.8
USHBP1-210ENST00000600286 CNTNAP1P78357 1384 aa20.07■□□□□ 0.8
USHBP1-210ENST00000600286 GNAT2P19087 354 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 NF2P35240 595 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 DYNLL1P63167 89 aaKnown RBP20.06■□□□□ 0.8
USHBP1-210ENST00000600286 ZMYM1Q5SVZ6 1142 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 ADGRA1Q86SQ6 560 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 USP48Q86UV5 1035 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 FAM83AQ86UY5 434 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 SKAP1Q86WV1 359 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 SH3RF3Q8TEJ3 882 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-210ENST00000600286 HOOK2Q96ED9 719 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 IDI2Q9BXS1 227 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 DEFB129Q9H1M3 183 aa20.06■□□□□ 0.8
USHBP1-210ENST00000600286 ZNF646O15015 1829 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-210ENST00000600286 ENTPD3O75355 529 aa20.05■□□□□ 0.8
USHBP1-210ENST00000600286 MBD4O95243 580 aa20.05■□□□□ 0.8
USHBP1-210ENST00000600286 PICALMQ13492 652 aa20.05■□□□□ 0.8
USHBP1-210ENST00000600286 MCMDC2Q4G0Z9 681 aa20.05■□□□□ 0.8
USHBP1-210ENST00000600286 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
USHBP1-210ENST00000600286 ASTN2O75129 1339 aaPredicted RBP20.04■□□□□ 0.8
USHBP1-210ENST00000600286 NPM3O75607 178 aaKnown RBP20.04■□□□□ 0.8
USHBP1-210ENST00000600286 CACNB3P54284 484 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 RHBDL3P58872 404 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 RASA3Q14644 834 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 SUPT20HL1Q3ZLR7 823 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 ZSCAN29Q8IWY8 852 aaPredicted RBP20.04■□□□□ 0.8
USHBP1-210ENST00000600286 AMOTL1Q8IY63 956 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 FAM151AQ8WW52 585 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 OSBP2Q969R2 916 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 PUS7LQ9H0K6 701 aaKnown RBP20.04■□□□□ 0.8
USHBP1-210ENST00000600286 ARMT1Q9H993 441 aa20.04■□□□□ 0.8
USHBP1-210ENST00000600286 TGFBRAP1Q8WUH2 860 aa20.03■□□□□ 0.8
USHBP1-210ENST00000600286 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
USHBP1-210ENST00000600286 GLIS2Q9BZE0 524 aaPredicted RBP20.03■□□□□ 0.8
USHBP1-210ENST00000600286 NACAP1Q9BZK3 213 aa20.03■□□□□ 0.8
USHBP1-210ENST00000600286 SLC4A4Q9Y6R1 1079 aa20.03■□□□□ 0.8
USHBP1-210ENST00000600286 MYH2Q9UKX2 1941 aa20.02■□□□□ 0.8
USHBP1-210ENST00000600286 TMEM88BA6NKF7 163 aa20.02■□□□□ 0.8
USHBP1-210ENST00000600286 GPAA1O43292 621 aa20.02■□□□□ 0.8
USHBP1-210ENST00000600286 APPP05067 770 aa20.02■□□□□ 0.8
USHBP1-210ENST00000600286 TCP10Q12799 353 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms