RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 ATF7IPQ6VMQ6 1270 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 SLF2Q8IX21 1173 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 FAM151AQ8WW52 585 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 FRAT1Q92837 279 aaPredicted RBP14.17□□□□□ -0.14
HIF3A-217ENST00000600236 MS4A4AQ96JQ5 239 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 DAGLAQ9Y4D2 1042 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 CETPP11597 493 aa14.16□□□□□ -0.14
HIF3A-217ENST00000600236 PHKA1P46020 1223 aa14.16□□□□□ -0.14
HIF3A-217ENST00000600236 SP3Q02447 781 aa14.16□□□□□ -0.14
HIF3A-217ENST00000600236 MTX1Q13505 466 aa14.16□□□□□ -0.14
HIF3A-217ENST00000600236 MVPQ14764 893 aaKnown RBP14.16□□□□□ -0.14
HIF3A-217ENST00000600236 TAF1CQ15572 869 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-217ENST00000600236 DIXDC1Q155Q3 683 aa14.16□□□□□ -0.14
HIF3A-217ENST00000600236 CCDC102BQ68D86 513 aa14.16□□□□□ -0.14
HIF3A-217ENST00000600236 PTPN18Q99952 460 aa14.16□□□□□ -0.14
HIF3A-217ENST00000600236 PDS5AQ29RF7 1337 aaKnown RBP14.15□□□□□ -0.14
HIF3A-217ENST00000600236 GNAI2P04899 355 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 TRIM27P14373 513 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 SNAPC2Q13487 334 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 SPTY2D1Q68D10 685 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-217ENST00000600236 CDC42EP5Q6NZY7 148 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 OTOP1Q7RTM1 612 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 DZIP1Q86YF9 867 aaKnown RBP14.15□□□□□ -0.14
HIF3A-217ENST00000600236 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 BRI3BPQ8WY22 251 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 EFCC1Q9HA90 598 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 USP40Q9NVE5 1235 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 SNCAIPQ9Y6H5 919 aa14.15□□□□□ -0.14
HIF3A-217ENST00000600236 A0A1B0GUL7 405 aa14.14□□□□□ -0.15
HIF3A-217ENST00000600236 PPATQ06203 517 aa14.14□□□□□ -0.15
HIF3A-217ENST00000600236 TCP10Q12799 353 aa14.14□□□□□ -0.15
HIF3A-217ENST00000600236 PPIL2Q13356 520 aa14.14□□□□□ -0.15
HIF3A-217ENST00000600236 MIGA2Q7L4E1 593 aa14.14□□□□□ -0.15
HIF3A-217ENST00000600236 CD99L2Q8TCZ2 262 aa14.14□□□□□ -0.15
HIF3A-217ENST00000600236 ZCCHC17Q9NP64 241 aaKnown RBP14.14□□□□□ -0.15
HIF3A-217ENST00000600236 ABCF2Q9UG63 623 aa14.14□□□□□ -0.15
HIF3A-217ENST00000600236 ADORA1P30542 326 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 TIMM10P62072 90 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 TFCP2Q12800 502 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
HIF3A-217ENST00000600236 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 ZKSCAN4Q969J2 545 aaPredicted RBP14.13□□□□□ -0.15
HIF3A-217ENST00000600236 XAGE2Q96GT9 111 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 NEUROD6Q96NK8 337 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 PTPN22Q9Y2R2 807 aa14.13□□□□□ -0.15
HIF3A-217ENST00000600236 LAMB1P07942 1786 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 IRF6O14896 467 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 ENTPD3O75355 529 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 BCAR3O75815 825 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 CENPBP07199 599 aaPredicted RBP14.12□□□□□ -0.15
HIF3A-217ENST00000600236 NFIAQ12857 509 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 RASGRF1Q13972 1273 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 KIF22Q14807 665 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 FAM43AQ8N2R8 423 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 CLUAP1Q96AJ1 413 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 OTOFQ9HC10 1997 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 GAKO14976 1311 aa14.12□□□□□ -0.15
HIF3A-217ENST00000600236 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
HIF3A-217ENST00000600236 ZSCAN29Q8IWY8 852 aaPredicted RBP14.11□□□□□ -0.15
HIF3A-217ENST00000600236 FTSJ3Q8IY81 847 aaKnown RBP14.11□□□□□ -0.15
HIF3A-217ENST00000600236 IDI2Q9BXS1 227 aa14.11□□□□□ -0.15
HIF3A-217ENST00000600236 BTBD19C9JJ37 291 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 TLR2O60603 784 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 INPP5BP32019 993 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 RGS3P49796 1198 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 GSTO1P78417 241 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 NOL9Q5SY16 702 aaKnown RBP14.1□□□□□ -0.15
HIF3A-217ENST00000600236 FAM198AQ9UFP1 575 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 ZNF112Q9UJU3 913 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 MROH7-TTC4A0A0A0MT08 1334 aa14.1□□□□□ -0.15
HIF3A-217ENST00000600236 LDHCP07864 332 aa14.09□□□□□ -0.15
HIF3A-217ENST00000600236 UQCRFS1P1P0C7P4 283 aa14.09□□□□□ -0.15
HIF3A-217ENST00000600236 BTDP43251 543 aa14.09□□□□□ -0.15
HIF3A-217ENST00000600236 OS9Q13438 667 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-217ENST00000600236 ANKRD23Q86SG2 305 aa14.09□□□□□ -0.15
HIF3A-217ENST00000600236 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
HIF3A-217ENST00000600236 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
HIF3A-217ENST00000600236 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-217ENST00000600236 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-217ENST00000600236 PICK1Q9NRD5 415 aa14.09□□□□□ -0.15
HIF3A-217ENST00000600236 MYH13Q9UKX3 1938 aa14.08□□□□□ -0.16
HIF3A-217ENST00000600236 PNMA6EA0A0J9YXQ4 647 aa14.08□□□□□ -0.16
HIF3A-217ENST00000600236 MAP4K4O95819 1239 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-217ENST00000600236 GNRH1P01148 92 aa14.08□□□□□ -0.16
HIF3A-217ENST00000600236 SPATA5Q8NB90 893 aa14.08□□□□□ -0.16
HIF3A-217ENST00000600236 KCNH4Q9UQ05 1017 aa14.08□□□□□ -0.16
HIF3A-217ENST00000600236 TNNQ9UQP3 1299 aa14.08□□□□□ -0.16
HIF3A-217ENST00000600236 ARID4AP29374 1257 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-217ENST00000600236 PRMT2P55345 433 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 MECOMQ03112 1051 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 PICALMQ13492 652 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 ARMC5Q96C12 935 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 PARK7Q99497 189 aaKnown RBP14.07□□□□□ -0.16
HIF3A-217ENST00000600236 NOL10Q9BSC4 688 aaKnown RBP14.07□□□□□ -0.16
HIF3A-217ENST00000600236 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 RAI14Q9P0K7 980 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms