RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 RCAN3Q9UKA8 241 aa17.11■□□□□ 0.33
IRF3-225ENST00000600022 EYA2O00167 538 aa17.1■□□□□ 0.33
IRF3-225ENST00000600022 SLURP2P0DP57 97 aa17.1■□□□□ 0.33
IRF3-225ENST00000600022 NFIAQ12857 509 aa17.1■□□□□ 0.33
IRF3-225ENST00000600022 PUM3Q15397 648 aaKnown RBP17.1■□□□□ 0.33
IRF3-225ENST00000600022 HHIPL2Q6UWX4 724 aa17.1■□□□□ 0.33
IRF3-225ENST00000600022 FAM83AQ86UY5 434 aa17.1■□□□□ 0.33
IRF3-225ENST00000600022 ERO1BQ86YB8 467 aa17.1■□□□□ 0.33
IRF3-225ENST00000600022 TLR2O60603 784 aa17.09■□□□□ 0.33
IRF3-225ENST00000600022 CDC42EP5Q6NZY7 148 aa17.09■□□□□ 0.33
IRF3-225ENST00000600022 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
IRF3-225ENST00000600022 SIL1Q9H173 461 aa17.09■□□□□ 0.33
IRF3-225ENST00000600022 PTPRCP08575 1304 aa17.09■□□□□ 0.33
IRF3-225ENST00000600022 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.32
IRF3-225ENST00000600022 CETPP11597 493 aa17.08■□□□□ 0.32
IRF3-225ENST00000600022 PRDX5P30044 214 aa17.08■□□□□ 0.32
IRF3-225ENST00000600022 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.32
IRF3-225ENST00000600022 HABP4Q5JVS0 413 aaKnown RBP17.08■□□□□ 0.32
IRF3-225ENST00000600022 FKBP1CQ5VVH2 108 aa17.08■□□□□ 0.32
IRF3-225ENST00000600022 FAM198AQ9UFP1 575 aa17.08■□□□□ 0.32
IRF3-225ENST00000600022 CPA4Q9UI42 421 aa17.08■□□□□ 0.32
IRF3-225ENST00000600022 DAGLAQ9Y4D2 1042 aa17.08■□□□□ 0.32
IRF3-225ENST00000600022 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
IRF3-225ENST00000600022 PPIL2Q13356 520 aa17.07■□□□□ 0.32
IRF3-225ENST00000600022 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
IRF3-225ENST00000600022 MOGSQ13724 837 aa17.07■□□□□ 0.32
IRF3-225ENST00000600022 LPIN2Q92539 896 aa17.07■□□□□ 0.32
IRF3-225ENST00000600022 TMEM106CQ9BVX2 250 aa17.07■□□□□ 0.32
IRF3-225ENST00000600022 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
IRF3-225ENST00000600022 C17orf99Q6UX52 265 aa17.06■□□□□ 0.32
IRF3-225ENST00000600022 FAM151AQ8WW52 585 aa17.06■□□□□ 0.32
IRF3-225ENST00000600022 ZNF341Q9BYN7 854 aa17.06■□□□□ 0.32
IRF3-225ENST00000600022 ZNF112Q9UJU3 913 aa17.06■□□□□ 0.32
IRF3-225ENST00000600022 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
IRF3-225ENST00000600022 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
IRF3-225ENST00000600022 KIF16BQ96L93 1317 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 SLC5A1P13866 664 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 ADORA1P30542 326 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 PHKA1P46020 1223 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 MTFR1Q15390 333 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 ERICH6BQ5W0A0 696 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 USP40Q9NVE5 1235 aa17.05■□□□□ 0.32
IRF3-225ENST00000600022 PDHXO00330 501 aa17.04■□□□□ 0.32
IRF3-225ENST00000600022 PPATQ06203 517 aa17.04■□□□□ 0.32
IRF3-225ENST00000600022 DCAF15Q66K64 600 aa17.04■□□□□ 0.32
IRF3-225ENST00000600022 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
IRF3-225ENST00000600022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
IRF3-225ENST00000600022 RBBP6Q7Z6E9 1792 aaKnown RBP17.04■□□□□ 0.32
IRF3-225ENST00000600022 MAST3O60307 1309 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 RANBP2P49792 3224 aaKnown RBP17.03■□□□□ 0.32
IRF3-225ENST00000600022 SZT2Q5T011 3432 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 GPAT2Q6NUI2 795 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 SH3BP5LQ7L8J4 393 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 NBPF11Q86T75 865 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
IRF3-225ENST00000600022 CEP290O15078 2479 aa17.03■□□□□ 0.32
IRF3-225ENST00000600022 ADGRA2Q96PE1 1338 aa17.02■□□□□ 0.32
IRF3-225ENST00000600022 PSMC4P43686 418 aa17.02■□□□□ 0.32
IRF3-225ENST00000600022 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
IRF3-225ENST00000600022 RRP1P56182 461 aaKnown RBP17.02■□□□□ 0.32
IRF3-225ENST00000600022 TIMM10P62072 90 aa17.02■□□□□ 0.32
IRF3-225ENST00000600022 KCNH4Q9UQ05 1017 aa17.02■□□□□ 0.32
IRF3-225ENST00000600022 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
IRF3-225ENST00000600022 LRRFIP2Q9Y608 721 aaKnown RBP17.02■□□□□ 0.32
IRF3-225ENST00000600022 PHF20L1A8MW92 1017 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 LDHBP07195 334 aaKnown RBP17.01■□□□□ 0.31
IRF3-225ENST00000600022 CYP2C8P10632 490 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 ARHGEF6Q15052 776 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 ANKRD23Q86SG2 305 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 GCC1Q96CN9 775 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 HOOK2Q96ED9 719 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 ZCCHC17Q9NP64 241 aaKnown RBP17.01■□□□□ 0.31
IRF3-225ENST00000600022 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
IRF3-225ENST00000600022 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.01■□□□□ 0.31
IRF3-225ENST00000600022 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
IRF3-225ENST00000600022 H0YGN5 161 aa17■□□□□ 0.31
IRF3-225ENST00000600022 UBTFL1P0CB47 393 aaPredicted RBP17■□□□□ 0.31
IRF3-225ENST00000600022 OSBPP22059 807 aa17■□□□□ 0.31
IRF3-225ENST00000600022 RGS3P49796 1198 aa17■□□□□ 0.31
IRF3-225ENST00000600022 KIF22Q14807 665 aa17■□□□□ 0.31
IRF3-225ENST00000600022 SHISA4Q96DD7 197 aa17■□□□□ 0.31
IRF3-225ENST00000600022 MEIS3Q99687 375 aa17■□□□□ 0.31
IRF3-225ENST00000600022 SRRDQ9UH36 339 aa17■□□□□ 0.31
IRF3-225ENST00000600022 ATRNL1Q5VV63 1379 aa17■□□□□ 0.31
IRF3-225ENST00000600022 DDTLA6NHG4 134 aaPredicted RBP16.99■□□□□ 0.31
IRF3-225ENST00000600022 CIAO1O76071 339 aa16.99■□□□□ 0.31
IRF3-225ENST00000600022 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
IRF3-225ENST00000600022 CCDC102BQ68D86 513 aa16.99■□□□□ 0.31
IRF3-225ENST00000600022 CCDC84Q86UT8 332 aaPredicted RBP16.99■□□□□ 0.31
IRF3-225ENST00000600022 DDX4Q9NQI0 724 aaKnown RBP16.99■□□□□ 0.31
IRF3-225ENST00000600022 WDHD1O75717 1129 aaPredicted RBP16.98■□□□□ 0.31
IRF3-225ENST00000600022 FMNL1O95466 1100 aaPredicted RBP16.98■□□□□ 0.31
IRF3-225ENST00000600022 NOL9Q5SY16 702 aaKnown RBP16.98■□□□□ 0.31
IRF3-225ENST00000600022 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
IRF3-225ENST00000600022 GABRQQ9UN88 632 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms