RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 MTX1Q13505 466 aa10.98□□□□□ -0.65
ARHGEF1-215ENST00000598444 VGLL4Q14135 290 aa10.98□□□□□ -0.65
ARHGEF1-215ENST00000598444 ZKSCAN2Q63HK3 967 aa10.98□□□□□ -0.65
ARHGEF1-215ENST00000598444 CDC42EP5Q6NZY7 148 aa10.98□□□□□ -0.65
ARHGEF1-215ENST00000598444 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■■ 33.4
ARHGEF1-215ENST00000598444 NEUROD6Q96NK8 337 aa10.98□□□□□ -0.65
ARHGEF1-215ENST00000598444 PTPN18Q99952 460 aa10.98□□□□□ -0.65
ARHGEF1-215ENST00000598444 A0A1B0GUL7 405 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 TCP10Q12799 353 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 G3BP1Q13283 466 aaKnown RBP eCLIP10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 DCAF15Q66K64 600 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 MIGA2Q7L4E1 593 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 ZGPATQ8N5A5 531 aaKnown RBP10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 TMEM57Q8N5G2 664 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 FAM151AQ8WW52 585 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 XAGE2Q96GT9 111 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 WRNIP1Q96S55 665 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 USP40Q9NVE5 1235 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 SALL1Q9NSC2 1324 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 DOCK2Q92608 1830 aa10.97□□□□□ -0.65
ARHGEF1-215ENST00000598444 CCL15-CCL14A0A0B4J2E2 113 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 PNMA6EA0A0J9YXQ4 647 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 GTF2A2P52657 109 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 SOX10P56693 466 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 CRHR2Q13324 411 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 CCL15Q16663 113 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 GORABQ5T7V8 394 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 FBXO46Q6PJ61 603 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 ERO1BQ86YB8 467 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 ZNF341Q9BYN7 854 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 ABCF2Q9UG63 623 aa10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF1-215ENST00000598444 CENPFP49454 3210 aa10.96□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZBTB22O15209 634 aa10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 NFIAQ12857 509 aa10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 RASGRF1Q13972 1273 aa10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 DZIP1Q86YF9 867 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 BRI3BPQ8WY22 251 aa10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 FAM198AQ9UFP1 575 aa10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
ARHGEF1-215ENST00000598444 RPAP1Q9BWH6 1393 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 INPP5BP32019 993 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 SP3Q02447 781 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 TAF1CQ15572 869 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 ERICH6Q7L0X2 663 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 OTOP1Q7RTM1 612 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZFPM1Q8IX07 1006 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 CD99L2Q8TCZ2 262 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 TRIM17Q9Y577 477 aa10.94□□□□□ -0.66
ARHGEF1-215ENST00000598444 HTTP42858 3142 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 PDS5AQ29RF7 1337 aaKnown RBP10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 IRF6O14896 467 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 CETPP11597 493 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 RGS3P49796 1198 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 PPIL2Q13356 520 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 SNAPC2Q13487 334 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 FAM43AQ8N2R8 423 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 FAM163AQ96GL9 167 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZFYVE28Q9HCC9 887 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 HMG20BQ9P0W2 317 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZNF112Q9UJU3 913 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 PTPRFP10586 1907 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 CDK5RAP2Q96SN8 1893 aa10.93□□□□□ -0.66
ARHGEF1-215ENST00000598444 GAKO14976 1311 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 ENTPD3O75355 529 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 WDHD1O75717 1129 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 MECOMQ03112 1051 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 PPATQ06203 517 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 OS9Q13438 667 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 POLA2Q14181 598 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 TBC1D9Q6ZT07 1266 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 ITPRIPQ8IWB1 547 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZSCAN29Q8IWY8 852 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 SPATA5Q8NB90 893 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 IDI2Q9BXS1 227 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 C1orf115Q9H7X2 142 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 EFCC1Q9HA90 598 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZSWIM8A7E2V4 1837 aa10.92□□□□□ -0.66
ARHGEF1-215ENST00000598444 MGAMO43451 1857 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 ATAD5Q96QE3 1844 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 MROH7-TTC4A0A0A0MT08 1334 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 DOCK3Q8IZD9 2030 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 BTBD19C9JJ37 291 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZBTB7BO15156 539 aaPredicted RBP10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 SURF6O75683 361 aaKnown RBP10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 LDHCP07864 332 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 UQCRFS1P1P0C7P4 283 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms