RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 NSUN4Q96CB9 384 aaKnown RBP27.93■■■□□ 2.06
IRF3-220ENST00000598108 WBP1LQ9NX94 342 aa27.93■■■□□ 2.06
IRF3-220ENST00000598108 TMOD2Q9NZR1 351 aa27.93■■■□□ 2.06
IRF3-220ENST00000598108 ANGEL1Q9UNK9 670 aaKnown RBP27.93■■■□□ 2.06
IRF3-220ENST00000598108 TNNI2P48788 182 aa27.92■■■□□ 2.06
IRF3-220ENST00000598108 LDLRAD1Q5T700 205 aa27.92■■■□□ 2.06
IRF3-220ENST00000598108 CCDC102AQ96A19 550 aa27.92■■■□□ 2.06
IRF3-220ENST00000598108 RAI14Q9P0K7 980 aa27.92■■■□□ 2.06
IRF3-220ENST00000598108 LRP2BPQ9P2M1 347 aa27.92■■■□□ 2.06
IRF3-220ENST00000598108 NDUFB9Q9Y6M9 179 aa27.92■■■□□ 2.06
IRF3-220ENST00000598108 MYH13Q9UKX3 1938 aa27.92■■■□□ 2.06
IRF3-220ENST00000598108 NFIAQ12857 509 aa27.91■■■□□ 2.06
IRF3-220ENST00000598108 FAM83AQ86UY5 434 aa27.91■■■□□ 2.06
IRF3-220ENST00000598108 DCTPP1Q9H773 170 aa27.91■■■□□ 2.06
IRF3-220ENST00000598108 PIH1D3Q9NQM4 214 aaKnown RBP27.91■■■□□ 2.06
IRF3-220ENST00000598108 PAPPA2Q9BXP8 1791 aa27.91■■■□□ 2.06
IRF3-220ENST00000598108 SMARCA5O60264 1052 aaPredicted RBP27.9■■■□□ 2.06
IRF3-220ENST00000598108 USP2O75604 605 aaPredicted RBP27.9■■■□□ 2.06
IRF3-220ENST00000598108 SLC10A3P09131 477 aa27.9■■■□□ 2.06
IRF3-220ENST00000598108 IFIT2P09913 472 aaKnown RBP27.9■■■□□ 2.06
IRF3-220ENST00000598108 NOGQ13253 232 aa27.9■■■□□ 2.06
IRF3-220ENST00000598108 RASAL3Q86YV0 1011 aa27.9■■■□□ 2.06
IRF3-220ENST00000598108 SLF2Q8IX21 1173 aa27.9■■■□□ 2.06
IRF3-220ENST00000598108 MAP3K11Q16584 847 aa27.89■■■□□ 2.06
IRF3-220ENST00000598108 FAM198AQ9UFP1 575 aa27.89■■■□□ 2.06
IRF3-220ENST00000598108 MROH7-TTC4A0A0A0MT08 1334 aa27.89■■■□□ 2.05
IRF3-220ENST00000598108 ECM29Q5VYK3 1845 aa27.88■■■□□ 2.05
IRF3-220ENST00000598108 GPR75-ASB3A0A0A6YYF3 556 aa27.88■■■□□ 2.05
IRF3-220ENST00000598108 PPP1R12BO60237 982 aaPredicted RBP27.88■■■□□ 2.05
IRF3-220ENST00000598108 BTDP43251 543 aa27.88■■■□□ 2.05
IRF3-220ENST00000598108 MAP2K1Q02750 393 aaPredicted RBP27.88■■■□□ 2.05
IRF3-220ENST00000598108 TCP10Q12799 353 aa27.88■■■□□ 2.05
IRF3-220ENST00000598108 LRRCC1Q9C099 1032 aa27.88■■■□□ 2.05
IRF3-220ENST00000598108 FOXN1O15353 648 aa27.87■■■□□ 2.05
IRF3-220ENST00000598108 ZFPM1Q8IX07 1006 aa27.87■■■□□ 2.05
IRF3-220ENST00000598108 ANTXR1Q9H6X2 564 aa27.87■■■□□ 2.05
IRF3-220ENST00000598108 SUPT16HQ9Y5B9 1047 aaKnown RBP27.87■■■□□ 2.05
IRF3-220ENST00000598108 GSTO1P78417 241 aa27.86■■■□□ 2.05
IRF3-220ENST00000598108 KIF23Q02241 960 aaPredicted RBP27.86■■■□□ 2.05
IRF3-220ENST00000598108 FAM151AQ8WW52 585 aa27.86■■■□□ 2.05
IRF3-220ENST00000598108 CLMNQ96JQ2 1002 aa27.86■■■□□ 2.05
IRF3-220ENST00000598108 LDHCP07864 332 aa27.85■■■□□ 2.05
IRF3-220ENST00000598108 RHBDL3P58872 404 aa27.85■■■□□ 2.05
IRF3-220ENST00000598108 WDHD1O75717 1129 aaPredicted RBP27.84■■■□□ 2.05
IRF3-220ENST00000598108 NAA16Q6N069 864 aaPredicted RBP27.84■■■□□ 2.05
IRF3-220ENST00000598108 IDI2Q9BXS1 227 aa27.84■■■□□ 2.05
IRF3-220ENST00000598108 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.84■■■□□ 2.05
IRF3-220ENST00000598108 AKAP11Q9UKA4 1901 aa27.83■■■□□ 2.05
IRF3-220ENST00000598108 IREB2P48200 963 aaKnown RBP27.83■■■□□ 2.05
IRF3-220ENST00000598108 RGS3P49796 1198 aa27.83■■■□□ 2.05
IRF3-220ENST00000598108 ADGRA1Q86SQ6 560 aa27.83■■■□□ 2.05
IRF3-220ENST00000598108 DDX4Q9NQI0 724 aaKnown RBP27.83■■■□□ 2.05
IRF3-220ENST00000598108 AIDAQ96BJ3 306 aa27.82■■■□□ 2.04
IRF3-220ENST00000598108 SLC10A4Q96EP9 437 aa27.82■■■□□ 2.04
IRF3-220ENST00000598108 CSRNP1Q96S65 589 aa27.82■■■□□ 2.04
IRF3-220ENST00000598108 THSD7BQ9C0I4 1608 aa27.81■■■□□ 2.04
IRF3-220ENST00000598108 IDH1O75874 414 aaKnown RBP27.81■■■□□ 2.04
IRF3-220ENST00000598108 MKRN3Q13064 507 aaKnown RBP27.81■■■□□ 2.04
IRF3-220ENST00000598108 MIGA2Q7L4E1 593 aa27.81■■■□□ 2.04
IRF3-220ENST00000598108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.81■■■□□ 2.04
IRF3-220ENST00000598108 RFX7Q2KHR2 1363 aa27.81■■■□□ 2.04
IRF3-220ENST00000598108 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.8■■■□□ 2.04
IRF3-220ENST00000598108 SH3BP5LQ7L8J4 393 aa27.8■■■□□ 2.04
IRF3-220ENST00000598108 EXOC6Q8TAG9 804 aa27.8■■■□□ 2.04
IRF3-220ENST00000598108 MYH2Q9UKX2 1941 aa27.79■■■□□ 2.04
IRF3-220ENST00000598108 RPAP1Q9BWH6 1393 aaPredicted RBP27.79■■■□□ 2.04
IRF3-220ENST00000598108 UNCXA6NJT0 531 aa27.79■■■□□ 2.04
IRF3-220ENST00000598108 ENTPD3O75355 529 aa27.79■■■□□ 2.04
IRF3-220ENST00000598108 ANKRD13AQ8IZ07 590 aa27.79■■■□□ 2.04
IRF3-220ENST00000598108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.79■■■□□ 2.047e-6■□□□□ 9.2
IRF3-220ENST00000598108 EDC3Q96F86 508 aaKnown RBP27.79■■■□□ 2.04
IRF3-220ENST00000598108 BOLA2Q9H3K6 86 aa27.79■■■□□ 2.04
IRF3-220ENST00000598108 ATP5JP18859 108 aa27.78■■■□□ 2.04
IRF3-220ENST00000598108 CYP7A1P22680 504 aa27.78■■■□□ 2.04
IRF3-220ENST00000598108 MAP3K9P80192 1104 aa27.78■■■□□ 2.04
IRF3-220ENST00000598108 PICALMQ13492 652 aa27.78■■■□□ 2.04
IRF3-220ENST00000598108 SPRYD7Q5W111 196 aa27.78■■■□□ 2.04
IRF3-220ENST00000598108 SH3RF3Q8TEJ3 882 aaPredicted RBP27.78■■■□□ 2.04
IRF3-220ENST00000598108 DNAJC2Q99543 621 aaKnown RBP27.78■■■□□ 2.04
IRF3-220ENST00000598108 BEGAINQ9BUH8 593 aa27.78■■■□□ 2.04
IRF3-220ENST00000598108 AATFQ9NY61 560 aaKnown RBP eCLIP27.78■■■□□ 2.04
IRF3-220ENST00000598108 GOLIM4O00461 696 aa27.77■■■□□ 2.04
IRF3-220ENST00000598108 IGSF3O75054 1194 aa27.77■■■□□ 2.04
IRF3-220ENST00000598108 CTCFP49711 727 aaPredicted RBP27.77■■■□□ 2.04
IRF3-220ENST00000598108 PPP4CP60510 307 aa27.77■■■□□ 2.04
IRF3-220ENST00000598108 MAGEB6Q8N7X4 407 aa27.77■■■□□ 2.04
IRF3-220ENST00000598108 TSKSQ9UJT2 592 aa27.77■■■□□ 2.04
IRF3-220ENST00000598108 DDTLA6NHG4 134 aaPredicted RBP27.76■■■□□ 2.03
IRF3-220ENST00000598108 MAP4K4O95819 1239 aaPredicted RBP27.76■■■□□ 2.03
IRF3-220ENST00000598108 HSPA8P11142 646 aaKnown RBP27.76■■■□□ 2.03
IRF3-220ENST00000598108 GJA5P36382 358 aa27.76■■■□□ 2.03
IRF3-220ENST00000598108 VGLL4Q14135 290 aa27.76■■■□□ 2.03
IRF3-220ENST00000598108 HOOK2Q96ED9 719 aa27.76■■■□□ 2.03
IRF3-220ENST00000598108 WNK4Q96J92 1243 aa27.76■■■□□ 2.03
IRF3-220ENST00000598108 LBX1P52954 281 aa27.75■■■□□ 2.03
IRF3-220ENST00000598108 MAP3K12Q12852 859 aa27.75■■■□□ 2.03
IRF3-220ENST00000598108 HDAC1Q13547 482 aaPredicted RBP27.75■■■□□ 2.03
IRF3-220ENST00000598108 TEX11Q8IYF3 940 aa27.75■■■□□ 2.03
IRF3-220ENST00000598108 HAUS7Q99871 368 aa27.75■■■□□ 2.03
IRF3-220ENST00000598108 ELP3Q9H9T3 547 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms