RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 MYH13Q9UKX3 1938 aa19.83■□□□□ 0.77
USHBP1-206ENST00000596436 GNAI3P08754 354 aa19.83■□□□□ 0.77
USHBP1-206ENST00000596436 RFX5P48382 616 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-206ENST00000596436 BCAMP50895 628 aa19.83■□□□□ 0.77
USHBP1-206ENST00000596436 CACNB3P54284 484 aa19.83■□□□□ 0.77
USHBP1-206ENST00000596436 CHAF1AQ13111 956 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-206ENST00000596436 TAF1CQ15572 869 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-206ENST00000596436 KLHDC4Q8TBB5 520 aa19.83■□□□□ 0.77
USHBP1-206ENST00000596436 OTUD5Q96G74 571 aa19.83■□□□□ 0.77
USHBP1-206ENST00000596436 ZFYVE28Q9HCC9 887 aa19.83■□□□□ 0.77
USHBP1-206ENST00000596436 MAST3O60307 1309 aa19.82■□□□□ 0.76
USHBP1-206ENST00000596436 HHIPL2Q6UWX4 724 aa19.82■□□□□ 0.76
USHBP1-206ENST00000596436 ERO1BQ86YB8 467 aa19.82■□□□□ 0.76
USHBP1-206ENST00000596436 ITPRIPQ8IWB1 547 aa19.82■□□□□ 0.76
USHBP1-206ENST00000596436 ZSWIM8A7E2V4 1837 aa19.81■□□□□ 0.76
USHBP1-206ENST00000596436 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
USHBP1-206ENST00000596436 PUM3Q15397 648 aaKnown RBP19.81■□□□□ 0.76
USHBP1-206ENST00000596436 HOOK2Q96ED9 719 aa19.81■□□□□ 0.76
USHBP1-206ENST00000596436 TLR2O60603 784 aa19.8■□□□□ 0.76
USHBP1-206ENST00000596436 FRAT2O75474 233 aaPredicted RBP19.8■□□□□ 0.76
USHBP1-206ENST00000596436 CETPP11597 493 aa19.8■□□□□ 0.76
USHBP1-206ENST00000596436 EN2P19622 333 aaPredicted RBP19.8■□□□□ 0.76
USHBP1-206ENST00000596436 PPIL2Q13356 520 aa19.8■□□□□ 0.76
USHBP1-206ENST00000596436 WRNIP1Q96S55 665 aa19.8■□□□□ 0.76
USHBP1-206ENST00000596436 PTCH2Q9Y6C5 1203 aa19.8■□□□□ 0.76
USHBP1-206ENST00000596436 IRF6O14896 467 aa19.79■□□□□ 0.76
USHBP1-206ENST00000596436 ZBTB7BO15156 539 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-206ENST00000596436 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
USHBP1-206ENST00000596436 ZKSCAN4Q969J2 545 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-206ENST00000596436 TMOD2Q9NZR1 351 aa19.79■□□□□ 0.76
USHBP1-206ENST00000596436 BTBD19C9JJ37 291 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 EYA2O00167 538 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 ZBTB22O15209 634 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 GNAI2P04899 355 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 SNAPC2Q13487 334 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 C20orf194Q5TEA3 1177 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 ZNF112Q9UJU3 913 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 HDAC5Q9UQL6 1122 aa19.78■□□□□ 0.76
USHBP1-206ENST00000596436 LACTBP83111 547 aaPredicted RBP19.77■□□□□ 0.76
USHBP1-206ENST00000596436 PPATQ06203 517 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 SLC9C1Q4G0N8 1177 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 HABP4Q5JVS0 413 aaKnown RBP19.77■□□□□ 0.76
USHBP1-206ENST00000596436 DCAF15Q66K64 600 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 ATG9AQ7Z3C6 839 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 WDR66Q8TBY9 1149 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 FAM151AQ8WW52 585 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 LPIN2Q92539 896 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 C1orf115Q9H7X2 142 aa19.77■□□□□ 0.76
USHBP1-206ENST00000596436 GNRH1P01148 92 aa19.76■□□□□ 0.75
USHBP1-206ENST00000596436 MTX1Q13505 466 aa19.76■□□□□ 0.75
USHBP1-206ENST00000596436 NBPF11Q86T75 865 aa19.76■□□□□ 0.75
USHBP1-206ENST00000596436 ZNF341Q9BYN7 854 aa19.76■□□□□ 0.75
USHBP1-206ENST00000596436 COG6Q9Y2V7 657 aa19.76■□□□□ 0.75
USHBP1-206ENST00000596436 ADGRA2Q96PE1 1338 aa19.76■□□□□ 0.75
USHBP1-206ENST00000596436 WDHD1O75717 1129 aaPredicted RBP19.75■□□□□ 0.75
USHBP1-206ENST00000596436 MS4A1P11836 297 aa19.75■□□□□ 0.75
USHBP1-206ENST00000596436 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
USHBP1-206ENST00000596436 C17orf99Q6UX52 265 aa19.75■□□□□ 0.75
USHBP1-206ENST00000596436 TMEM106CQ9BVX2 250 aa19.75■□□□□ 0.75
USHBP1-206ENST00000596436 ARHGAP39Q9C0H5 1083 aa19.75■□□□□ 0.75
USHBP1-206ENST00000596436 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
USHBP1-206ENST00000596436 KCNH4Q9UQ05 1017 aa19.75■□□□□ 0.75
USHBP1-206ENST00000596436 PA2G4Q9UQ80 394 aaKnown RBP19.75■□□□□ 0.75
USHBP1-206ENST00000596436 DAGLAQ9Y4D2 1042 aa19.75■□□□□ 0.75
USHBP1-206ENST00000596436 PNMA6EA0A0J9YXQ4 647 aa19.74■□□□□ 0.75
USHBP1-206ENST00000596436 SRGAP3O43295 1099 aa19.74■□□□□ 0.75
USHBP1-206ENST00000596436 SLC5A1P13866 664 aa19.74■□□□□ 0.75
USHBP1-206ENST00000596436 INPP5BP32019 993 aa19.74■□□□□ 0.75
USHBP1-206ENST00000596436 PRMT2P55345 433 aa19.74■□□□□ 0.75
USHBP1-206ENST00000596436 MOGSQ13724 837 aa19.74■□□□□ 0.75
USHBP1-206ENST00000596436 SALL1Q9NSC2 1324 aa19.74■□□□□ 0.75
USHBP1-206ENST00000596436 ATRNL1Q5VV63 1379 aa19.73■□□□□ 0.75
USHBP1-206ENST00000596436 CIAO1O76071 339 aa19.73■□□□□ 0.75
USHBP1-206ENST00000596436 NOL9Q5SY16 702 aaKnown RBP19.73■□□□□ 0.75
USHBP1-206ENST00000596436 CDC42EP5Q6NZY7 148 aa19.73■□□□□ 0.75
USHBP1-206ENST00000596436 ANKRD23Q86SG2 305 aa19.73■□□□□ 0.75
USHBP1-206ENST00000596436 SIL1Q9H173 461 aa19.73■□□□□ 0.75
USHBP1-206ENST00000596436 CTGFP29279 349 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 PRDX5P30044 214 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 NFIAQ12857 509 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 PDE3AQ14432 1141 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 MIGA2Q7L4E1 593 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
USHBP1-206ENST00000596436 COPRSQ9NQ92 184 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 FAM198AQ9UFP1 575 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 DOCK2Q92608 1830 aa19.72■□□□□ 0.75
USHBP1-206ENST00000596436 RFX7Q2KHR2 1363 aa19.71■□□□□ 0.75
USHBP1-206ENST00000596436 KIF22Q14807 665 aa19.71■□□□□ 0.75
USHBP1-206ENST00000596436 DIXDC1Q155Q3 683 aa19.71■□□□□ 0.75
USHBP1-206ENST00000596436 SEMA3EO15041 775 aa19.7■□□□□ 0.74
USHBP1-206ENST00000596436 RRP1P56182 461 aaKnown RBP19.7■□□□□ 0.74
USHBP1-206ENST00000596436 SH3TC2Q8TF17 1288 aa19.7■□□□□ 0.74
USHBP1-206ENST00000596436 DDX19BQ9UMR2 479 aa19.7■□□□□ 0.74
USHBP1-206ENST00000596436 ATP8B2P98198 1209 aa19.69■□□□□ 0.74
USHBP1-206ENST00000596436 POLA2Q14181 598 aa19.69■□□□□ 0.74
USHBP1-206ENST00000596436 ATP2B3Q16720 1220 aa19.69■□□□□ 0.74
USHBP1-206ENST00000596436 TRIM47Q96LD4 638 aa19.69■□□□□ 0.74
USHBP1-206ENST00000596436 PDHXO00330 501 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
USHBP1-206ENST00000596436 MAP3K10Q02779 954 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms