RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CYP21A2P08686 494 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 RNF20Q5VTR2 975 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 RSBN1LQ6PCB5 846 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 HHIPL2Q6UWX4 724 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 TTF2Q9UNY4 1162 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 DAGLAQ9Y4D2 1042 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 TAF6LQ9Y6J9 622 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 SLC4A4Q9Y6R1 1079 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 MYO3BQ8WXR4 1341 aa17.6■□□□□ 0.41
SHKBP1-211ENST00000595945 CERS3Q8IU89 383 aa17.59■□□□□ 0.41
SHKBP1-211ENST00000595945 IFNL3Q8IZI9 196 aa17.59■□□□□ 0.41
SHKBP1-211ENST00000595945 TM6SF1Q9BZW5 370 aa17.59■□□□□ 0.41
SHKBP1-211ENST00000595945 RAD17O75943 681 aa17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 BAG3O95817 575 aa17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 YBX3P16989 372 aaKnown RBP eCLIP17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 ZKSCAN1P17029 563 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 BTDP43251 543 aa17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 RHBDL3P58872 404 aa17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 CXCL9Q07325 125 aa17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 GIMAP6Q6P9H5 292 aa17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 JDP2Q8WYK2 163 aa17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 CRNKL1Q9BZJ0 848 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-211ENST00000595945 F8W031 263 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-211ENST00000595945 FZD9O00144 591 aa17.57■□□□□ 0.4
SHKBP1-211ENST00000595945 CRKP46108 304 aa17.57■□□□□ 0.4
SHKBP1-211ENST00000595945 ADCK5Q3MIX3 580 aa17.57■□□□□ 0.4
SHKBP1-211ENST00000595945 CIAPIN1Q6FI81 312 aa17.57■□□□□ 0.4
SHKBP1-211ENST00000595945 IL27Q8NEV9 243 aa17.57■□□□□ 0.4
SHKBP1-211ENST00000595945 SH3RF3Q8TEJ3 882 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-211ENST00000595945 APPP05067 770 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 PLCG2P16885 1265 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 SCNN1DP51172 638 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 KRT32Q14532 448 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 ARHGAP27Q6ZUM4 889 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 STOX1Q6ZVD7 989 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 KIAA0825Q8IV33 1275 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 SDR42E1Q8WUS8 393 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 SNX21Q969T3 373 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 TEKT1Q969V4 418 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 NACAP1Q9BZK3 213 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 NBPF3Q9H094 633 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 ATP8A2Q9NTI2 1148 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 MKRN1Q9UHC7 482 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
SHKBP1-211ENST00000595945 LMNB1P20700 586 aa17.55■□□□□ 0.4
SHKBP1-211ENST00000595945 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-211ENST00000595945 APOBEC3HQ6NTF7 200 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-211ENST00000595945 ZDHHC15Q96MV8 337 aa17.55■□□□□ 0.4
SHKBP1-211ENST00000595945 NAPBQ9H115 298 aa17.55■□□□□ 0.4
SHKBP1-211ENST00000595945 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
SHKBP1-211ENST00000595945 DCP1AQ9NPI6 582 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-211ENST00000595945 TNIP1Q15025 636 aa17.54■□□□□ 0.4
SHKBP1-211ENST00000595945 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-211ENST00000595945 ANAPC4Q9UJX5 808 aa17.54■□□□□ 0.4
SHKBP1-211ENST00000595945 E7EWF7 191 aa17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 PSMA5P28066 241 aa17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 TDO2P48775 406 aa17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 HAND2P61296 217 aa17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 SBK1Q52WX2 424 aa17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 TEX11Q8IYF3 940 aa17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 TTC14Q96N46 770 aa17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 IPO9Q96P70 1041 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 GOLGB1Q14789 3259 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-211ENST00000595945 ZNF213O14771 459 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 CD2BP2O95400 341 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 CASTP20810 708 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 RPS12P25398 132 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 MMP14P50281 582 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 NEK4P51957 841 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 CDC42EP5Q6NZY7 148 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 CTR9Q6PD62 1173 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 TBC1D10CQ8IV04 446 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 TBC1D2Q9BYX2 928 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 UPF3BQ9BZI7 483 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 PCDHAC2Q9Y5I4 1007 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 TACC3Q9Y6A5 838 aa17.52■□□□□ 0.4
SHKBP1-211ENST00000595945 ZNF541Q9H0D2 1346 aa17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 EIF6P56537 245 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 PPARAQ07869 468 aa17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 RUFY3Q7L099 469 aa17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 TGFBRAP1Q8WUH2 860 aa17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 ZBED3Q96IU2 234 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 NEK1Q96PY6 1258 aa17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 MYH8P13535 1937 aa17.51■□□□□ 0.39
SHKBP1-211ENST00000595945 SIPA1L1O43166 1804 aa17.5■□□□□ 0.39
SHKBP1-211ENST00000595945 ST18O60284 1047 aa17.5■□□□□ 0.39
SHKBP1-211ENST00000595945 WDHD1O75717 1129 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-211ENST00000595945 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
SHKBP1-211ENST00000595945 CPA1P15085 419 aa17.5■□□□□ 0.39
SHKBP1-211ENST00000595945 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms