RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 SPDYE5A6NIY4 337 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 SOX10P56693 466 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 CRHR2Q13324 411 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 DIXDC1Q155Q3 683 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 DCAF15Q66K64 600 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 CCDC102BQ68D86 513 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 ZGPATQ8N5A5 531 aaKnown RBP22.19■■□□□ 1.14
HOMER3-208ENST00000595756 PTPN18Q99952 460 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 SNCAIPQ9Y6H5 919 aa22.19■■□□□ 1.14
HOMER3-208ENST00000595756 AK9Q5TCS8 1911 aa22.18■■□□□ 1.14
HOMER3-208ENST00000595756 ADORA1P30542 326 aa22.18■■□□□ 1.14
HOMER3-208ENST00000595756 GTF2A2P52657 109 aa22.18■■□□□ 1.14
HOMER3-208ENST00000595756 FAM151AQ8WW52 585 aa22.18■■□□□ 1.14
HOMER3-208ENST00000595756 CNKSR2Q8WXI2 1034 aa22.18■■□□□ 1.14
HOMER3-208ENST00000595756 WRNIP1Q96S55 665 aa22.18■■□□□ 1.14
HOMER3-208ENST00000595756 AKAP2Q9Y2D5 859 aa22.18■■□□□ 1.14
HOMER3-208ENST00000595756 BCAR3O75815 825 aa22.17■■□□□ 1.14
HOMER3-208ENST00000595756 CDC42EP5Q6NZY7 148 aa22.17■■□□□ 1.14
HOMER3-208ENST00000595756 FRAT1Q92837 279 aaPredicted RBP22.17■■□□□ 1.14
HOMER3-208ENST00000595756 OTUD5Q96G74 571 aa22.17■■□□□ 1.14
HOMER3-208ENST00000595756 RFX7Q2KHR2 1363 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 CCL15-CCL14A0A0B4J2E2 113 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 A0A1B0GUL7 405 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 GNAI2P04899 355 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 RASGRF1Q13972 1273 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 CCL15Q16663 113 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 ERO1BQ86YB8 467 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 BRI3BPQ8WY22 251 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 ERO1AQ96HE7 468 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 ZNF341Q9BYN7 854 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 TNNQ9UQP3 1299 aa22.16■■□□□ 1.14
HOMER3-208ENST00000595756 GAKO14976 1311 aa22.15■■□□□ 1.14
HOMER3-208ENST00000595756 MVPQ14764 893 aaKnown RBP22.15■■□□□ 1.14
HOMER3-208ENST00000595756 BRCA2P51587 3418 aa22.15■■□□□ 1.14
HOMER3-208ENST00000595756 RBBP6Q7Z6E9 1792 aaKnown RBP22.15■■□□□ 1.14
HOMER3-208ENST00000595756 TIMM10P62072 90 aa22.14■■□□□ 1.13
HOMER3-208ENST00000595756 TFCP2Q12800 502 aa22.14■■□□□ 1.13
HOMER3-208ENST00000595756 NFIAQ12857 509 aa22.14■■□□□ 1.13
HOMER3-208ENST00000595756 ZKSCAN2Q63HK3 967 aa22.14■■□□□ 1.13
HOMER3-208ENST00000595756 OTOP1Q7RTM1 612 aa22.14■■□□□ 1.13
HOMER3-208ENST00000595756 TRIM17Q9Y577 477 aa22.14■■□□□ 1.13
HOMER3-208ENST00000595756 MAST2Q6P0Q8 1798 aa22.14■■□□□ 1.13
HOMER3-208ENST00000595756 PDE4DIPQ5VU43 2346 aa22.13■■□□□ 1.13
HOMER3-208ENST00000595756 PPIL2Q13356 520 aa22.13■■□□□ 1.13
HOMER3-208ENST00000595756 ZKSCAN4Q969J2 545 aaPredicted RBP22.13■■□□□ 1.13
HOMER3-208ENST00000595756 CLUAP1Q96AJ1 413 aa22.13■■□□□ 1.13
HOMER3-208ENST00000595756 XAGE2Q96GT9 111 aa22.13■■□□□ 1.13
HOMER3-208ENST00000595756 ZCCHC17Q9NP64 241 aaKnown RBP22.13■■□□□ 1.13
HOMER3-208ENST00000595756 FAM198AQ9UFP1 575 aa22.13■■□□□ 1.13
HOMER3-208ENST00000595756 CETPP11597 493 aa22.12■■□□□ 1.13
HOMER3-208ENST00000595756 SP3Q02447 781 aa22.12■■□□□ 1.13
HOMER3-208ENST00000595756 TAF1CQ15572 869 aaPredicted RBP22.12■■□□□ 1.13
HOMER3-208ENST00000595756 DZIP1Q86YF9 867 aaKnown RBP22.12■■□□□ 1.13
HOMER3-208ENST00000595756 USP40Q9NVE5 1235 aa22.12■■□□□ 1.13
HOMER3-208ENST00000595756 ATRNL1Q5VV63 1379 aa22.12■■□□□ 1.13
HOMER3-208ENST00000595756 PPATQ06203 517 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 TCP10Q12799 353 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 SNAPC2Q13487 334 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 SPTY2D1Q68D10 685 aaPredicted RBP22.11■■□□□ 1.13
HOMER3-208ENST00000595756 SLF2Q8IX21 1173 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 FAM43AQ8N2R8 423 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 TMEM57Q8N5G2 664 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 CD99L2Q8TCZ2 262 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 IDI2Q9BXS1 227 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 ZFYVE28Q9HCC9 887 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 ZNF112Q9UJU3 913 aa22.11■■□□□ 1.13
HOMER3-208ENST00000595756 PNMA6EA0A0J9YXQ4 647 aa22.1■■□□□ 1.13
HOMER3-208ENST00000595756 IRF6O14896 467 aa22.1■■□□□ 1.13
HOMER3-208ENST00000595756 MIGA2Q7L4E1 593 aa22.1■■□□□ 1.13
HOMER3-208ENST00000595756 FAM163AQ96GL9 167 aaPredicted RBP22.1■■□□□ 1.13
HOMER3-208ENST00000595756 ABCF2Q9UG63 623 aa22.1■■□□□ 1.13
HOMER3-208ENST00000595756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.1■■□□□ 1.13
HOMER3-208ENST00000595756 MROH7-TTC4A0A0A0MT08 1334 aa22.09■■□□□ 1.13
HOMER3-208ENST00000595756 DOCK1Q14185 1865 aa22.09■■□□□ 1.13
HOMER3-208ENST00000595756 ENTPD3O75355 529 aa22.09■■□□□ 1.13
HOMER3-208ENST00000595756 INPP5BP32019 993 aa22.09■■□□□ 1.13
HOMER3-208ENST00000595756 NOL9Q5SY16 702 aaKnown RBP22.09■■□□□ 1.13
HOMER3-208ENST00000595756 WDHD1O75717 1129 aaPredicted RBP22.08■■□□□ 1.13
HOMER3-208ENST00000595756 ARID4AP29374 1257 aaPredicted RBP22.08■■□□□ 1.13
HOMER3-208ENST00000595756 RGS3P49796 1198 aa22.08■■□□□ 1.13
HOMER3-208ENST00000595756 EFCC1Q9HA90 598 aa22.08■■□□□ 1.13
HOMER3-208ENST00000595756 RCAN3Q9UKA8 241 aa22.08■■□□□ 1.13
HOMER3-208ENST00000595756 PTPN22Q9Y2R2 807 aa22.08■■□□□ 1.13
HOMER3-208ENST00000595756 MKI67P46013 3256 aaKnown RBP22.07■■□□□ 1.12
HOMER3-208ENST00000595756 G3BP1Q13283 466 aaKnown RBP eCLIP22.07■■□□□ 1.12
HOMER3-208ENST00000595756 NEUROD6Q96NK8 337 aa22.07■■□□□ 1.12
HOMER3-208ENST00000595756 KCNH4Q9UQ05 1017 aa22.07■■□□□ 1.12
HOMER3-208ENST00000595756 PTPRFP10586 1907 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 BTBD19C9JJ37 291 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 BTDP43251 543 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 POLA2Q14181 598 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 FTSJ3Q8IY81 847 aaKnown RBP22.06■■□□□ 1.12
HOMER3-208ENST00000595756 SPATA5Q8NB90 893 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 HMG20BQ9P0W2 317 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 ZSWIM8A7E2V4 1837 aa22.06■■□□□ 1.12
HOMER3-208ENST00000595756 COL2A1P02458 1487 aaPredicted RBP22.05■■□□□ 1.12
HOMER3-208ENST00000595756 TLR2O60603 784 aa22.05■■□□□ 1.12
HOMER3-208ENST00000595756 MECOMQ03112 1051 aa22.05■■□□□ 1.12
HOMER3-208ENST00000595756 ARHGEF6Q15052 776 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms