RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 MAFAQ8NHW3 353 aaPredicted RBP13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 FAM122AQ96E09 287 aa13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 SNAP23O00161 211 aa13.09□□□□□ -0.31
NOTCH3-203ENST00000595514 TNPO2O14787 897 aaKnown RBP13.09□□□□□ -0.31
NOTCH3-203ENST00000595514 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
NOTCH3-203ENST00000595514 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
NOTCH3-203ENST00000595514 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
NOTCH3-203ENST00000595514 SPEF2Q9C093 1822 aa13.09□□□□□ -0.31
NOTCH3-203ENST00000595514 ALPK3Q96L96 1907 aa13.08□□□□□ -0.32
NOTCH3-203ENST00000595514 TAF5LO75529 589 aa13.08□□□□□ -0.32
NOTCH3-203ENST00000595514 CYP2C8P10632 490 aa13.08□□□□□ -0.32
NOTCH3-203ENST00000595514 CRKP46108 304 aa13.08□□□□□ -0.32
NOTCH3-203ENST00000595514 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.32
NOTCH3-203ENST00000595514 DCAF15Q66K64 600 aa13.08□□□□□ -0.32
NOTCH3-203ENST00000595514 TNFRSF10AO00220 468 aa13.07□□□□□ -0.32
NOTCH3-203ENST00000595514 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
NOTCH3-203ENST00000595514 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
NOTCH3-203ENST00000595514 CDX2Q99626 313 aaPredicted RBP13.07□□□□□ -0.32
NOTCH3-203ENST00000595514 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
NOTCH3-203ENST00000595514 KCNH4Q9UQ05 1017 aa13.07□□□□□ -0.32
NOTCH3-203ENST00000595514 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
NOTCH3-203ENST00000595514 APAF1O14727 1248 aa13.06□□□□□ -0.32
NOTCH3-203ENST00000595514 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
NOTCH3-203ENST00000595514 CACNB3P54284 484 aa13.06□□□□□ -0.32
NOTCH3-203ENST00000595514 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
NOTCH3-203ENST00000595514 UBE3BQ7Z3V4 1068 aa13.06□□□□□ -0.32
NOTCH3-203ENST00000595514 TMOD2Q9NZR1 351 aa13.06□□□□□ -0.32
NOTCH3-203ENST00000595514 INPP5BP32019 993 aa13.05□□□□□ -0.32
NOTCH3-203ENST00000595514 MOGSQ13724 837 aa13.05□□□□□ -0.32
NOTCH3-203ENST00000595514 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
NOTCH3-203ENST00000595514 COA7Q96BR5 231 aa13.05□□□□□ -0.32
NOTCH3-203ENST00000595514 MBIPQ9NS73 344 aa13.05□□□□□ -0.32
NOTCH3-203ENST00000595514 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
NOTCH3-203ENST00000595514 CDH23Q9H251 3354 aa13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 GPAT2Q6NUI2 795 aa13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 MIGA2Q7L4E1 593 aa13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 FAM83AQ86UY5 434 aa13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 HMX1Q9NP08 348 aaPredicted RBP13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 COL2A1P02458 1487 aaPredicted RBP13.04□□□□□ -0.32
NOTCH3-203ENST00000595514 H7C1W4 665 aa13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 CXCL11O14625 94 aa13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 HMGCRP04035 888 aa13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 MYLIPQ8WY64 445 aa13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 PLA2G12BQ9BX93 195 aa13.03□□□□□ -0.32
NOTCH3-203ENST00000595514 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 NEURL1BA8MQ27 555 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 ELL2O00472 640 aaPredicted RBP13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 FOSL2P15408 326 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 CWF19L2Q2TBE0 894 aaKnown RBP13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 KSR2Q6VAB6 950 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 FASTKD5Q7L8L6 764 aaKnown RBP13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 TDRD7Q8NHU6 1098 aaKnown RBP13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 TEKT1Q969V4 418 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 SEMA6BQ9H3T3 888 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 OGDHLQ9ULD0 1010 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 PFASO15067 1338 aa13.02□□□□□ -0.33
NOTCH3-203ENST00000595514 PLIN1O60240 522 aa13.01□□□□□ -0.33
NOTCH3-203ENST00000595514 CSF1RP07333 972 aa13.01□□□□□ -0.33
NOTCH3-203ENST00000595514 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
NOTCH3-203ENST00000595514 HDLBPQ00341 1268 aaKnown RBP13.01□□□□□ -0.33
NOTCH3-203ENST00000595514 FKBP1CQ5VVH2 108 aa13.01□□□□□ -0.33
NOTCH3-203ENST00000595514 MYH3P11055 1940 aa13.01□□□□□ -0.33
NOTCH3-203ENST00000595514 MGAMO43451 1857 aa13□□□□□ -0.33
NOTCH3-203ENST00000595514 RPAP1Q9BWH6 1393 aaPredicted RBP13□□□□□ -0.33
NOTCH3-203ENST00000595514 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
NOTCH3-203ENST00000595514 NOL9Q5SY16 702 aaKnown RBP13□□□□□ -0.33
NOTCH3-203ENST00000595514 GADL1Q6ZQY3 521 aa13□□□□□ -0.33
NOTCH3-203ENST00000595514 CHMP4AQ9BY43 222 aa13□□□□□ -0.33
NOTCH3-203ENST00000595514 ZNF112Q9UJU3 913 aa13□□□□□ -0.33
NOTCH3-203ENST00000595514 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
NOTCH3-203ENST00000595514 CACNA1FO60840 1977 aa13□□□□□ -0.33
NOTCH3-203ENST00000595514 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 GYG1P46976 350 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 MAP3K12Q12852 859 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 IFIT5Q13325 482 aaKnown RBP12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 LRRC26Q2I0M4 334 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 ANKRD13CQ8N6S4 541 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 CHMP3Q9Y3E7 222 aa12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 DDX60LQ5H9U9 1706 aaKnown RBP12.99□□□□□ -0.33
NOTCH3-203ENST00000595514 A0A0G2JLL6 359 aaPredicted RBP12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 COL6A1P12109 1028 aa12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 GNAI1P63096 354 aa12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 TRIM32Q13049 653 aa12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 GRIK5Q16478 980 aa12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 PRRT2Q7Z6L0 340 aaPredicted RBP12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
NOTCH3-203ENST00000595514 ZDHHC15Q96MV8 337 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms