RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 EYSQ5T1H1 3165 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 NEURL1BA8MQ27 555 aa16.12■□□□□ 0.17
SCAF1-202ENST00000595242 CT47B1P0C2W7 299 aaPredicted RBP16.12■□□□□ 0.17
SCAF1-202ENST00000595242 MFSD14BQ5SR56 506 aa16.12■□□□□ 0.17
SCAF1-202ENST00000595242 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
SCAF1-202ENST00000595242 ADGRA2Q96PE1 1338 aa16.12■□□□□ 0.17
SCAF1-202ENST00000595242 PDHXO00330 501 aa16.11■□□□□ 0.17
SCAF1-202ENST00000595242 CSF1RP07333 972 aa16.11■□□□□ 0.17
SCAF1-202ENST00000595242 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
SCAF1-202ENST00000595242 ANKRD23Q86SG2 305 aa16.11■□□□□ 0.17
SCAF1-202ENST00000595242 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAF1-202ENST00000595242 EXOC6Q8TAG9 804 aa16.11■□□□□ 0.17
SCAF1-202ENST00000595242 ANKRD18BA2A2Z9 1011 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 ZNF853P0CG23 659 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 CAPN2P17655 700 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 BCAMP50895 628 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 FCGRTP55899 365 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 PPATQ06203 517 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 LRIT3Q3SXY7 679 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 CCDC30Q5VVM6 783 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 PAWRQ96IZ0 340 aaKnown RBP16.1■□□□□ 0.17
SCAF1-202ENST00000595242 DEFB118Q96PH6 123 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 GABRQQ9UN88 632 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 FAM205AQ6ZU69 1335 aa16.1■□□□□ 0.17
SCAF1-202ENST00000595242 ADCY3O60266 1144 aa16.09■□□□□ 0.17
SCAF1-202ENST00000595242 CRKP46108 304 aa16.09■□□□□ 0.17
SCAF1-202ENST00000595242 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
SCAF1-202ENST00000595242 PRUNE2Q8WUY3 3088 aa16.08■□□□□ 0.17
SCAF1-202ENST00000595242 CACNA1FO60840 1977 aa16.08■□□□□ 0.16
SCAF1-202ENST00000595242 SPTBN5Q9NRC6 3674 aaKnown RBP16.08■□□□□ 0.16
SCAF1-202ENST00000595242 ELNP15502 786 aa16.08■□□□□ 0.16
SCAF1-202ENST00000595242 CACNB3P54284 484 aa16.08■□□□□ 0.16
SCAF1-202ENST00000595242 C7orf61Q8IZ16 206 aa16.08■□□□□ 0.16
SCAF1-202ENST00000595242 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
SCAF1-202ENST00000595242 CHMP4AQ9BY43 222 aa16.08■□□□□ 0.16
SCAF1-202ENST00000595242 PLIN1O60240 522 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 INHAP05111 366 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 BCRP11274 1271 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 CASP7P55210 303 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 GCKRQ14397 625 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 NECAB2Q7Z6G3 386 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 TDHQ8IZJ6 230 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 TDRD7Q8NHU6 1098 aaKnown RBP16.07■□□□□ 0.16
SCAF1-202ENST00000595242 HOOK2Q96ED9 719 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 PAK6Q9NQU5 681 aaPredicted RBP16.07■□□□□ 0.16
SCAF1-202ENST00000595242 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
SCAF1-202ENST00000595242 ZMYND8Q9ULU4 1186 aaPredicted RBP16.07■□□□□ 0.16
SCAF1-202ENST00000595242 PTPRFP10586 1907 aa16.06■□□□□ 0.16
SCAF1-202ENST00000595242 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
SCAF1-202ENST00000595242 FANCIQ9NVI1 1328 aa16.06■□□□□ 0.16
SCAF1-202ENST00000595242 FLT3LGP49771 235 aa16.06■□□□□ 0.16
SCAF1-202ENST00000595242 GNAI1P63096 354 aa16.06■□□□□ 0.16
SCAF1-202ENST00000595242 IFIT5Q13325 482 aaKnown RBP16.06■□□□□ 0.16
SCAF1-202ENST00000595242 PXYLP1Q8TE99 480 aa16.06■□□□□ 0.16
SCAF1-202ENST00000595242 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
SCAF1-202ENST00000595242 CRBNQ96SW2 442 aa16.06■□□□□ 0.16
SCAF1-202ENST00000595242 PARK7Q99497 189 aaKnown RBP16.06■□□□□ 0.16
SCAF1-202ENST00000595242 CRISPLD2Q9H0B8 497 aa16.06■□□□□ 0.16
SCAF1-202ENST00000595242 CYP2C8P10632 490 aa16.05■□□□□ 0.16
SCAF1-202ENST00000595242 MOGSQ13724 837 aa16.05■□□□□ 0.16
SCAF1-202ENST00000595242 DCAF15Q66K64 600 aa16.05■□□□□ 0.16
SCAF1-202ENST00000595242 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
SCAF1-202ENST00000595242 KCNH4Q9UQ05 1017 aa16.05■□□□□ 0.16
SCAF1-202ENST00000595242 SYN1P17600 705 aa16.04■□□□□ 0.16
SCAF1-202ENST00000595242 INPP5BP32019 993 aa16.04■□□□□ 0.16
SCAF1-202ENST00000595242 MAGEA10P43363 369 aaPredicted RBP16.04■□□□□ 0.16
SCAF1-202ENST00000595242 GYG1P46976 350 aa16.04■□□□□ 0.16
SCAF1-202ENST00000595242 RARSP54136 660 aaKnown RBP16.04■□□□□ 0.16
SCAF1-202ENST00000595242 CALD1Q05682 793 aaKnown RBP16.04■□□□□ 0.16
SCAF1-202ENST00000595242 PDE3AQ14432 1141 aa16.04■□□□□ 0.16
SCAF1-202ENST00000595242 FAM83AQ86UY5 434 aa16.04■□□□□ 0.16
SCAF1-202ENST00000595242 ZNF341Q9BYN7 854 aa16.04■□□□□ 0.16
SCAF1-202ENST00000595242 CHMP3Q9Y3E7 222 aa16.04■□□□□ 0.16
SCAF1-202ENST00000595242 HIBADHP31937 336 aaKnown RBP16.03■□□□□ 0.16
SCAF1-202ENST00000595242 IRF5Q13568 498 aa16.03■□□□□ 0.16
SCAF1-202ENST00000595242 GRIK5Q16478 980 aa16.03■□□□□ 0.16
SCAF1-202ENST00000595242 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
SCAF1-202ENST00000595242 TSPYL6Q8N831 410 aa16.03■□□□□ 0.16
SCAF1-202ENST00000595242 UBE2OQ9C0C9 1292 aaKnown RBP16.03■□□□□ 0.16
SCAF1-202ENST00000595242 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
SCAF1-202ENST00000595242 MYH13Q9UKX3 1938 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 RPTORQ8N122 1335 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 TNPO2O14787 897 aaKnown RBP16.02■□□□□ 0.16
SCAF1-202ENST00000595242 BCAR3O75815 825 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 HDLBPQ00341 1268 aaKnown RBP16.02■□□□□ 0.16
SCAF1-202ENST00000595242 G2E3Q7L622 706 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
SCAF1-202ENST00000595242 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 PRDM6Q9NQX0 595 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
SCAF1-202ENST00000595242 DNAH12Q6ZR08 3092 aa16.02■□□□□ 0.15
SCAF1-202ENST00000595242 FOXO4P98177 505 aa16.01■□□□□ 0.15
SCAF1-202ENST00000595242 FKBP1CQ5VVH2 108 aa16.01■□□□□ 0.15
SCAF1-202ENST00000595242 GPAT2Q6NUI2 795 aa16.01■□□□□ 0.15
SCAF1-202ENST00000595242 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
SCAF1-202ENST00000595242 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
SCAF1-202ENST00000595242 CNNM1Q9NRU3 951 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms