RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 IL17RAQ96F46 866 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 ZIC5Q96T25 663 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
VMP1-217ENST00000593168 EYA3Q99504 573 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 KIF2CQ99661 725 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 TNRC18O15417 2968 aaPredicted RBP16.15■□□□□ 0.18
VMP1-217ENST00000593168 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 YDJCA8MPS7 323 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 CA12O43570 354 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 PDE6AP16499 860 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 PTH1RQ03431 593 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 DLK2Q6UY11 383 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 WDR66Q8TBY9 1149 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 ZC3H15Q8WU90 426 aaKnown RBP16.14■□□□□ 0.17
VMP1-217ENST00000593168 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
VMP1-217ENST00000593168 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 POLR2AP24928 1970 aaKnown RBP16.14■□□□□ 0.17
VMP1-217ENST00000593168 COL1A1P02452 1464 aaPredicted RBP16.14■□□□□ 0.17
VMP1-217ENST00000593168 SALL1Q9NSC2 1324 aa16.14■□□□□ 0.17
VMP1-217ENST00000593168 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
VMP1-217ENST00000593168 TNIP1Q15025 636 aa16.13■□□□□ 0.17
VMP1-217ENST00000593168 SLFNL1Q499Z3 407 aa16.13■□□□□ 0.17
VMP1-217ENST00000593168 CDC37L1Q7L3B6 337 aa16.13■□□□□ 0.17
VMP1-217ENST00000593168 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
VMP1-217ENST00000593168 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
VMP1-217ENST00000593168 COA1Q9GZY4 146 aa16.13■□□□□ 0.17
VMP1-217ENST00000593168 CNOT7Q9UIV1 285 aaKnown RBP16.13■□□□□ 0.17
VMP1-217ENST00000593168 MAST3O60307 1309 aa16.13■□□□□ 0.17
VMP1-217ENST00000593168 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
VMP1-217ENST00000593168 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
VMP1-217ENST00000593168 DGKZQ13574 1117 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 SPTY2D1Q68D10 685 aaPredicted RBP16.12■□□□□ 0.17
VMP1-217ENST00000593168 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 MAGEB6Q8N7X4 407 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 KCNB2Q92953 911 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 DSCC1Q9BVC3 393 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 ABCF2Q9UG63 623 aa16.12■□□□□ 0.17
VMP1-217ENST00000593168 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
VMP1-217ENST00000593168 M0R2C6 588 aa16.11■□□□□ 0.17
VMP1-217ENST00000593168 CHAF1AQ13111 956 aaPredicted RBP16.11■□□□□ 0.17
VMP1-217ENST00000593168 NECTIN1Q15223 517 aa16.11■□□□□ 0.17
VMP1-217ENST00000593168 RABEP1Q15276 862 aa16.11■□□□□ 0.17
VMP1-217ENST00000593168 CCDC129Q6ZRS4 1044 aa16.11■□□□□ 0.17
VMP1-217ENST00000593168 MICALL2Q8IY33 904 aa16.11■□□□□ 0.17
VMP1-217ENST00000593168 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
VMP1-217ENST00000593168 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
VMP1-217ENST00000593168 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
VMP1-217ENST00000593168 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
VMP1-217ENST00000593168 RIMBP2O15034 1052 aa16.1■□□□□ 0.17
VMP1-217ENST00000593168 HUNKP57058 714 aa16.1■□□□□ 0.17
VMP1-217ENST00000593168 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
VMP1-217ENST00000593168 FAM205AQ6ZU69 1335 aa16.1■□□□□ 0.17
VMP1-217ENST00000593168 H7C1D1 291 aa16.09■□□□□ 0.17
VMP1-217ENST00000593168 GPAA1O43292 621 aa16.09■□□□□ 0.17
VMP1-217ENST00000593168 HSPD1P10809 573 aaKnown RBP16.09■□□□□ 0.17
VMP1-217ENST00000593168 NOGQ13253 232 aa16.09■□□□□ 0.17
VMP1-217ENST00000593168 RNF20Q5VTR2 975 aa16.09■□□□□ 0.17
VMP1-217ENST00000593168 SAMD7Q7Z3H4 446 aa16.09■□□□□ 0.17
VMP1-217ENST00000593168 TBC1D22AQ8WUA7 517 aa16.09■□□□□ 0.17
VMP1-217ENST00000593168 PALD1Q9ULE6 856 aa16.09■□□□□ 0.17
VMP1-217ENST00000593168 FAM155AB1AL88 458 aaPredicted RBP16.08■□□□□ 0.16
VMP1-217ENST00000593168 PSMD14O00487 310 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 EGFRP00533 1210 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 CYP7A1P22680 504 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 BECN1Q14457 450 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 TSGA10IPQ3SY00 556 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 CREB3L3Q68CJ9 461 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 NAA16Q6N069 864 aaPredicted RBP16.08■□□□□ 0.16
VMP1-217ENST00000593168 PODNQ7Z5L7 613 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 SNX21Q969T3 373 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 NSUN4Q96CB9 384 aaKnown RBP16.08■□□□□ 0.16
VMP1-217ENST00000593168 STRBPQ96SI9 672 aaKnown RBP16.08■□□□□ 0.16
VMP1-217ENST00000593168 SNX14Q9Y5W7 946 aa16.08■□□□□ 0.16
VMP1-217ENST00000593168 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
VMP1-217ENST00000593168 TBC1D10BQ4KMP7 808 aaPredicted RBP16.07■□□□□ 0.16
VMP1-217ENST00000593168 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
VMP1-217ENST00000593168 RASEFQ8IZ41 740 aa16.07■□□□□ 0.16
VMP1-217ENST00000593168 DPF2Q92785 391 aa16.07■□□□□ 0.16
VMP1-217ENST00000593168 DBNDD1Q9H9R9 158 aa16.07■□□□□ 0.16
VMP1-217ENST00000593168 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
VMP1-217ENST00000593168 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 ADM5C9JUS6 153 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 G3V3G9 751 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 SLC27A2O14975 620 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
VMP1-217ENST00000593168 GNAT2P19087 354 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 PRDX5P30044 214 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 MECOMQ03112 1051 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 DCAF8Q5TAQ9 597 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 RGMBQ6NW40 437 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 TM6SF1Q9BZW5 370 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 KCNQ5Q9NR82 932 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 SUGT1Q9Y2Z0 365 aa16.06■□□□□ 0.16
VMP1-217ENST00000593168 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
VMP1-217ENST00000593168 PATL2C9JE40 543 aaKnown RBP16.05■□□□□ 0.16
VMP1-217ENST00000593168 FOXP2O15409 715 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 MBD4O95243 580 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms