RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 OTUD5Q96G74 571 aa19.99■□□□□ 0.79
CIRBP-241ENST00000593048 WRNIP1Q96S55 665 aa19.99■□□□□ 0.79
CIRBP-241ENST00000593048 TNNQ9UQP3 1299 aa19.99■□□□□ 0.79
CIRBP-241ENST00000593048 DAGLAQ9Y4D2 1042 aa19.99■□□□□ 0.79
CIRBP-241ENST00000593048 A0A1B0GUL7 405 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 TCP10Q12799 353 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 MTX1Q13505 466 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 ZKSCAN2Q63HK3 967 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 CDC42EP5Q6NZY7 148 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 FBXO46Q6PJ61 603 aaPredicted RBP19.98■□□□□ 0.79
CIRBP-241ENST00000593048 NEUROD6Q96NK8 337 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 USP40Q9NVE5 1235 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 SALL1Q9NSC2 1324 aa19.98■□□□□ 0.79
CIRBP-241ENST00000593048 CCL15-CCL14A0A0B4J2E2 113 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 TESPA1A2RU30 521 aaPredicted RBP19.97■□□□□ 0.79
CIRBP-241ENST00000593048 G3BP1Q13283 466 aaKnown RBP eCLIP19.97■□□□□ 0.79
CIRBP-241ENST00000593048 CRHR2Q13324 411 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 CCL15Q16663 113 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 GORABQ5T7V8 394 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 MIGA2Q7L4E1 593 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 FAM151AQ8WW52 585 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 XAGE2Q96GT9 111 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 PTPN18Q99952 460 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 ZNF341Q9BYN7 854 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 ABCF2Q9UG63 623 aa19.97■□□□□ 0.79
CIRBP-241ENST00000593048 MVPQ14764 893 aaKnown RBP19.96■□□□□ 0.79
CIRBP-241ENST00000593048 DZIP1Q86YF9 867 aaKnown RBP19.96■□□□□ 0.79
CIRBP-241ENST00000593048 SLF2Q8IX21 1173 aa19.96■□□□□ 0.79
CIRBP-241ENST00000593048 ZKSCAN4Q969J2 545 aaPredicted RBP19.96■□□□□ 0.79
CIRBP-241ENST00000593048 MS4A4AQ96JQ5 239 aa19.96■□□□□ 0.79
CIRBP-241ENST00000593048 SPDYE5A6NIY4 337 aa19.95■□□□□ 0.78
CIRBP-241ENST00000593048 RASGRF1Q13972 1273 aa19.95■□□□□ 0.78
CIRBP-241ENST00000593048 SPTY2D1Q68D10 685 aaPredicted RBP19.95■□□□□ 0.78
CIRBP-241ENST00000593048 ERO1BQ86YB8 467 aa19.95■□□□□ 0.78
CIRBP-241ENST00000593048 TMEM57Q8N5G2 664 aa19.95■□□□□ 0.78
CIRBP-241ENST00000593048 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
CIRBP-241ENST00000593048 YTHDC1Q96MU7 727 aaKnown RBP19.95■□□□□ 0.78
CIRBP-241ENST00000593048 PCDH10Q9P2E7 1040 aa19.95■□□□□ 0.78
CIRBP-241ENST00000593048 TRIM17Q9Y577 477 aa19.95■□□□□ 0.78
CIRBP-241ENST00000593048 RPAP1Q9BWH6 1393 aaPredicted RBP19.95■□□□□ 0.78
CIRBP-241ENST00000593048 WDHD1O75717 1129 aaPredicted RBP19.94■□□□□ 0.78
CIRBP-241ENST00000593048 NFIAQ12857 509 aa19.94■□□□□ 0.78
CIRBP-241ENST00000593048 FTSJ3Q8IY81 847 aaKnown RBP19.94■□□□□ 0.78
CIRBP-241ENST00000593048 BRI3BPQ8WY22 251 aa19.94■□□□□ 0.78
CIRBP-241ENST00000593048 ZFYVE28Q9HCC9 887 aa19.94■□□□□ 0.78
CIRBP-241ENST00000593048 SNCAIPQ9Y6H5 919 aa19.94■□□□□ 0.78
CIRBP-241ENST00000593048 MYH13Q9UKX3 1938 aa19.94■□□□□ 0.78
CIRBP-241ENST00000593048 PNMA6EA0A0J9YXQ4 647 aa19.93■□□□□ 0.78
CIRBP-241ENST00000593048 ZBTB22O15209 634 aa19.93■□□□□ 0.78
CIRBP-241ENST00000593048 CETPP11597 493 aa19.93■□□□□ 0.78
CIRBP-241ENST00000593048 SP3Q02447 781 aa19.93■□□□□ 0.78
CIRBP-241ENST00000593048 TAF1CQ15572 869 aaPredicted RBP19.93■□□□□ 0.78
CIRBP-241ENST00000593048 ERICH6Q7L0X2 663 aa19.93■□□□□ 0.78
CIRBP-241ENST00000593048 SNAPC2Q13487 334 aa19.92■□□□□ 0.78
CIRBP-241ENST00000593048 OTOP1Q7RTM1 612 aa19.92■□□□□ 0.78
CIRBP-241ENST00000593048 CD99L2Q8TCZ2 262 aa19.92■□□□□ 0.78
CIRBP-241ENST00000593048 FAM198AQ9UFP1 575 aa19.92■□□□□ 0.78
CIRBP-241ENST00000593048 PDS5AQ29RF7 1337 aaKnown RBP19.92■□□□□ 0.78
CIRBP-241ENST00000593048 LAMB1P07942 1786 aa19.92■□□□□ 0.78
CIRBP-241ENST00000593048 OTOFQ9HC10 1997 aa19.92■□□□□ 0.78
CIRBP-241ENST00000593048 IRF6O14896 467 aa19.91■□□□□ 0.78
CIRBP-241ENST00000593048 INPP5BP32019 993 aa19.91■□□□□ 0.78
CIRBP-241ENST00000593048 PPIL2Q13356 520 aa19.91■□□□□ 0.78
CIRBP-241ENST00000593048 OS9Q13438 667 aaPredicted RBP19.91■□□□□ 0.78
CIRBP-241ENST00000593048 ZSCAN29Q8IWY8 852 aaPredicted RBP19.91■□□□□ 0.78
CIRBP-241ENST00000593048 PPATQ06203 517 aa19.9■□□□□ 0.78
CIRBP-241ENST00000593048 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
CIRBP-241ENST00000593048 EFCC1Q9HA90 598 aa19.9■□□□□ 0.78
CIRBP-241ENST00000593048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.9■□□□□ 0.78
CIRBP-241ENST00000593048 GAKO14976 1311 aa19.89■□□□□ 0.77
CIRBP-241ENST00000593048 BTDP43251 543 aa19.89■□□□□ 0.77
CIRBP-241ENST00000593048 RGS3P49796 1198 aa19.89■□□□□ 0.77
CIRBP-241ENST00000593048 ARHGEF6Q15052 776 aa19.89■□□□□ 0.77
CIRBP-241ENST00000593048 PRPF38BQ5VTL8 546 aaKnown RBP19.89■□□□□ 0.77
CIRBP-241ENST00000593048 ITPRIPQ8IWB1 547 aa19.89■□□□□ 0.77
CIRBP-241ENST00000593048 ZFPM1Q8IX07 1006 aa19.89■□□□□ 0.77
CIRBP-241ENST00000593048 FAM163AQ96GL9 167 aaPredicted RBP19.89■□□□□ 0.77
CIRBP-241ENST00000593048 HMG20BQ9P0W2 317 aa19.89■□□□□ 0.77
CIRBP-241ENST00000593048 ENTPD3O75355 529 aa19.88■□□□□ 0.77
CIRBP-241ENST00000593048 GSTO1P78417 241 aa19.88■□□□□ 0.77
CIRBP-241ENST00000593048 MECOMQ03112 1051 aa19.88■□□□□ 0.77
CIRBP-241ENST00000593048 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.88■□□□□ 0.77
CIRBP-241ENST00000593048 SPATA5Q8NB90 893 aa19.88■□□□□ 0.77
CIRBP-241ENST00000593048 IDI2Q9BXS1 227 aa19.88■□□□□ 0.77
CIRBP-241ENST00000593048 ZNF112Q9UJU3 913 aa19.88■□□□□ 0.77
CIRBP-241ENST00000593048 MROH7-TTC4A0A0A0MT08 1334 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 BTBD19C9JJ37 291 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 LDHCP07864 332 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 UQCRFS1P1P0C7P4 283 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 ATP8B2P98198 1209 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 PICALMQ13492 652 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 ZCCHC17Q9NP64 241 aaKnown RBP19.87■□□□□ 0.77
CIRBP-241ENST00000593048 RAI14Q9P0K7 980 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 PTPN22Q9Y2R2 807 aa19.87■□□□□ 0.77
CIRBP-241ENST00000593048 SURF6O75683 361 aaKnown RBP19.86■□□□□ 0.77
CIRBP-241ENST00000593048 ARID4AP29374 1257 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-241ENST00000593048 POLA2Q14181 598 aa19.86■□□□□ 0.77
CIRBP-241ENST00000593048 PI16Q6UXB8 463 aa19.86■□□□□ 0.77
CIRBP-241ENST00000593048 TBC1D9Q6ZT07 1266 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms