RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
SMCO4P1-201ENST00000592909 ZDHHC15Q96MV8 337 aa12.86□□□□□ -0.35
SMCO4P1-201ENST00000592909 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
SMCO4P1-201ENST00000592909 TMOD2Q9NZR1 351 aa12.86□□□□□ -0.35
SMCO4P1-201ENST00000592909 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 RPAP1Q9BWH6 1393 aaPredicted RBP12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 BCRP11274 1271 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 INPP5BP32019 993 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 FCGRTP55899 365 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 MOGSQ13724 837 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 APOBEC3HQ6NTF7 200 aaKnown RBP12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 STAP2Q9UGK3 403 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 ZNF112Q9UJU3 913 aa12.85□□□□□ -0.35
SMCO4P1-201ENST00000592909 BMP8BP34820 402 aa12.84□□□□□ -0.35
SMCO4P1-201ENST00000592909 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
SMCO4P1-201ENST00000592909 MIGA2Q7L4E1 593 aa12.84□□□□□ -0.35
SMCO4P1-201ENST00000592909 PARK7Q99497 189 aaKnown RBP12.84□□□□□ -0.35
SMCO4P1-201ENST00000592909 GABRQQ9UN88 632 aa12.84□□□□□ -0.35
SMCO4P1-201ENST00000592909 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
SMCO4P1-201ENST00000592909 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
SMCO4P1-201ENST00000592909 ADCY3O60266 1144 aa12.83□□□□□ -0.36
SMCO4P1-201ENST00000592909 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
SMCO4P1-201ENST00000592909 NOL9Q5SY16 702 aaKnown RBP12.83□□□□□ -0.36
SMCO4P1-201ENST00000592909 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
SMCO4P1-201ENST00000592909 VPS37DQ86XT2 251 aa12.83□□□□□ -0.36
SMCO4P1-201ENST00000592909 PXYLP1Q8TE99 480 aa12.83□□□□□ -0.36
SMCO4P1-201ENST00000592909 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 GRM8O00222 908 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 CXCL11O14625 94 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 TFRCP02786 760 aaKnown RBP12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 CHAF1AQ13111 956 aaPredicted RBP12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 IRF5Q13568 498 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 GDF15Q99988 308 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 CRISPLD2Q9H0B8 497 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 IQSEC3Q9UPP2 1182 aaPredicted RBP12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 MAST3O60307 1309 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
SMCO4P1-201ENST00000592909 F6X3S4 739 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 VAMP4O75379 141 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 FRAT2O75474 233 aaPredicted RBP12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 INHAP05111 366 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 CYP2C8P10632 490 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 FLT3LGP49771 235 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 CAVIN4Q5BKX8 364 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 DEFB118Q96PH6 123 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 IL16Q14005 1332 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 LAMA3Q16787 3333 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
SMCO4P1-201ENST00000592909 LRIT3Q3SXY7 679 aa12.8□□□□□ -0.36
SMCO4P1-201ENST00000592909 DEFB123Q8N688 67 aa12.8□□□□□ -0.36
SMCO4P1-201ENST00000592909 COL6A3P12111 3177 aa12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 ELNP15502 786 aa12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 BCAMP50895 628 aa12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 FASTKD5Q7L8L6 764 aaKnown RBP12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 NECAB2Q7Z6G3 386 aa12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 C9orf78Q9NZ63 289 aaPredicted RBP12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 SLC45A1Q9Y2W3 748 aa12.79□□□□□ -0.36
SMCO4P1-201ENST00000592909 A0A0G2JLL6 359 aaPredicted RBP12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 TNPO2O14787 897 aaKnown RBP12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 ALDH1L1O75891 902 aa12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 PRRT2Q7Z6L0 340 aaPredicted RBP12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 ANKLE1Q8NAG6 615 aa12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 MTMR10Q9NXD2 777 aa12.78□□□□□ -0.36
SMCO4P1-201ENST00000592909 PDE8BO95263 885 aa12.77□□□□□ -0.37
SMCO4P1-201ENST00000592909 TCP10Q12799 353 aa12.77□□□□□ -0.37
SMCO4P1-201ENST00000592909 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
SMCO4P1-201ENST00000592909 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
SMCO4P1-201ENST00000592909 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.37
SMCO4P1-201ENST00000592909 SUCLG2Q96I99 432 aa12.77□□□□□ -0.37
SMCO4P1-201ENST00000592909 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
SMCO4P1-201ENST00000592909 PHF20L1A8MW92 1017 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 PTPRAP18433 802 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 NFIAQ12857 509 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 Q7L0L9 218 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 SCYL3Q8IZE3 742 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 WDR66Q8TBY9 1149 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 DIS3LQ8TF46 1054 aaKnown RBP12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 DAGLAQ9Y4D2 1042 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 ZHX2Q9Y6X8 837 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
SMCO4P1-201ENST00000592909 FGFR2P21802 821 aa12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 TDHQ8IZJ6 230 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms