RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 RFX5P48382 616 aaPredicted RBP12.62□□□□□ -0.39
VMP1-214ENST00000592106 CLCN6P51797 869 aa12.62□□□□□ -0.39
VMP1-214ENST00000592106 HHIPL2Q6UWX4 724 aa12.62□□□□□ -0.39
VMP1-214ENST00000592106 FAM83AQ86UY5 434 aa12.62□□□□□ -0.39
VMP1-214ENST00000592106 CDCA7LQ96GN5 454 aa12.62□□□□□ -0.39
VMP1-214ENST00000592106 TMEM39BQ9GZU3 492 aa12.62□□□□□ -0.39
VMP1-214ENST00000592106 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
VMP1-214ENST00000592106 TESPA1A2RU30 521 aaPredicted RBP12.61□□□□□ -0.39
VMP1-214ENST00000592106 SEMA3EO15041 775 aa12.61□□□□□ -0.39
VMP1-214ENST00000592106 IL15P40933 162 aaPredicted RBP12.61□□□□□ -0.39
VMP1-214ENST00000592106 GTF2A2P52657 109 aa12.61□□□□□ -0.39
VMP1-214ENST00000592106 VGLL4Q14135 290 aa12.61□□□□□ -0.39
VMP1-214ENST00000592106 ARHGEF6Q15052 776 aa12.61□□□□□ -0.39
VMP1-214ENST00000592106 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
VMP1-214ENST00000592106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.61□□□□□ -0.39
VMP1-214ENST00000592106 TEPSINQ96N21 525 aa12.61□□□□□ -0.39
VMP1-214ENST00000592106 SIL1Q9H173 461 aa12.61□□□□□ -0.39
VMP1-214ENST00000592106 TRIM17Q9Y577 477 aa12.61□□□□□ -0.39
VMP1-214ENST00000592106 GNAI3P08754 354 aa12.6□□□□□ -0.39
VMP1-214ENST00000592106 GJA5P36382 358 aa12.6□□□□□ -0.39
VMP1-214ENST00000592106 CRHR2Q13324 411 aa12.6□□□□□ -0.39
VMP1-214ENST00000592106 GRIK5Q16478 980 aa12.6□□□□□ -0.39
VMP1-214ENST00000592106 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
VMP1-214ENST00000592106 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
VMP1-214ENST00000592106 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
VMP1-214ENST00000592106 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
VMP1-214ENST00000592106 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
VMP1-214ENST00000592106 LRRFIP2Q9Y608 721 aaKnown RBP12.6□□□□□ -0.39
VMP1-214ENST00000592106 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 SPDYE5A6NIY4 337 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
VMP1-214ENST00000592106 CACNB3P54284 484 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 SP3Q02447 781 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 TAF1CQ15572 869 aaPredicted RBP12.59□□□□□ -0.39
VMP1-214ENST00000592106 CCL15Q16663 113 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.59□□□□□ -0.39
VMP1-214ENST00000592106 OTOP1Q7RTM1 612 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 ATG9AQ7Z3C6 839 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 R3HDMLQ9H3Y0 253 aa12.59□□□□□ -0.39
VMP1-214ENST00000592106 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.4
VMP1-214ENST00000592106 CETPP11597 493 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
VMP1-214ENST00000592106 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
VMP1-214ENST00000592106 ERO1BQ86YB8 467 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 CD99L2Q8TCZ2 262 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 EFCC1Q9HA90 598 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 ZCCHC17Q9NP64 241 aaKnown RBP12.58□□□□□ -0.4
VMP1-214ENST00000592106 SALL1Q9NSC2 1324 aa12.58□□□□□ -0.4
VMP1-214ENST00000592106 PRDX5P30044 214 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 RARSP54136 660 aaKnown RBP12.57□□□□□ -0.4
VMP1-214ENST00000592106 SNAPC2Q13487 334 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
VMP1-214ENST00000592106 FAM151AQ8WW52 585 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 BRI3BPQ8WY22 251 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 MEIS3Q99687 375 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 COPRSQ9NQ92 184 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 DAGLAQ9Y4D2 1042 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
VMP1-214ENST00000592106 PPIL2Q13356 520 aa12.56□□□□□ -0.4
VMP1-214ENST00000592106 MVPQ14764 893 aaKnown RBP12.56□□□□□ -0.4
VMP1-214ENST00000592106 KIF22Q14807 665 aa12.56□□□□□ -0.4
VMP1-214ENST00000592106 SPTY2D1Q68D10 685 aaPredicted RBP12.56□□□□□ -0.4
VMP1-214ENST00000592106 DZIP1Q86YF9 867 aaKnown RBP12.56□□□□□ -0.4
VMP1-214ENST00000592106 PTPN18Q99952 460 aa12.56□□□□□ -0.4
VMP1-214ENST00000592106 PA2G4Q9UQ80 394 aaKnown RBP12.56□□□□□ -0.4
VMP1-214ENST00000592106 PTPN22Q9Y2R2 807 aa12.56□□□□□ -0.4
VMP1-214ENST00000592106 SRGAP3O43295 1099 aa12.55□□□□□ -0.4
VMP1-214ENST00000592106 PHKA1P46020 1223 aa12.55□□□□□ -0.4
VMP1-214ENST00000592106 PPATQ06203 517 aa12.55□□□□□ -0.4
VMP1-214ENST00000592106 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
VMP1-214ENST00000592106 CCDC102BQ68D86 513 aa12.55□□□□□ -0.4
VMP1-214ENST00000592106 PDS5AQ29RF7 1337 aaKnown RBP12.55□□□□□ -0.4
VMP1-214ENST00000592106 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
VMP1-214ENST00000592106 EVX2Q03828 476 aa12.54□□□□□ -0.4
VMP1-214ENST00000592106 TCP10Q12799 353 aa12.54□□□□□ -0.4
VMP1-214ENST00000592106 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
VMP1-214ENST00000592106 CDC42EP5Q6NZY7 148 aa12.54□□□□□ -0.4
VMP1-214ENST00000592106 ZKSCAN4Q969J2 545 aaPredicted RBP12.54□□□□□ -0.4
VMP1-214ENST00000592106 USP40Q9NVE5 1235 aa12.54□□□□□ -0.4
VMP1-214ENST00000592106 AK9Q5TCS8 1911 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 IRF6O14896 467 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 GNAI2P04899 355 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 MTX1Q13505 466 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 NOL9Q5SY16 702 aaKnown RBP12.53□□□□□ -0.4
VMP1-214ENST00000592106 GORABQ5T7V8 394 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 NBPF11Q86T75 865 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 FAM43AQ8N2R8 423 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
VMP1-214ENST00000592106 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
VMP1-214ENST00000592106 A0A1B0GUL7 405 aa12.52□□□□□ -0.41
VMP1-214ENST00000592106 BTBD19C9JJ37 291 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms