RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 MRVI1Q9Y6F6 885 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
MBD1-227ENST00000592060 CPLX1O14810 134 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 AKNAD1Q5T1N1 836 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 OTUD7BQ6GQQ9 843 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 INCENPQ9NQS7 918 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 LRP2BPQ9P2M1 347 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 SLC4A4Q9Y6R1 1079 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 NID2Q14112 1375 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.54
MBD1-227ENST00000592060 ADGRA1Q86SQ6 560 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 STAG1Q8WVM7 1258 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 IQSEC3Q9UPP2 1182 aaPredicted RBP18.41■□□□□ 0.54
MBD1-227ENST00000592060 MAST2Q6P0Q8 1798 aa18.41■□□□□ 0.54
MBD1-227ENST00000592060 GNPATO15228 680 aa18.4■□□□□ 0.54
MBD1-227ENST00000592060 KDM4AO75164 1064 aa18.4■□□□□ 0.54
MBD1-227ENST00000592060 LIFRP42702 1097 aa18.4■□□□□ 0.54
MBD1-227ENST00000592060 GNL3LQ9NVN8 582 aaKnown RBP18.4■□□□□ 0.54
MBD1-227ENST00000592060 RTEL1Q9NZ71 1219 aa18.4■□□□□ 0.54
MBD1-227ENST00000592060 ZKSCAN5Q9Y2L8 839 aa18.4■□□□□ 0.54
MBD1-227ENST00000592060 CYP7A1P22680 504 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 MSNP26038 577 aaKnown RBP18.39■□□□□ 0.53
MBD1-227ENST00000592060 CDC27P30260 824 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 CKAP2LQ8IYA6 745 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 MIGA1Q8NAN2 632 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 NACAP1Q9BZK3 213 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 KRT23Q9C075 422 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 GOLPH3LQ9H4A5 285 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 ZSWIM5Q9P217 1185 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
MBD1-227ENST00000592060 TDO2P48775 406 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 FAM200AQ8TCP9 573 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 SETDB2Q96T68 719 aa18.39■□□□□ 0.53
MBD1-227ENST00000592060 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
MBD1-227ENST00000592060 ZBTB43O43298 467 aa18.38■□□□□ 0.53
MBD1-227ENST00000592060 CDKL5O76039 1030 aa18.38■□□□□ 0.53
MBD1-227ENST00000592060 ADCY5O95622 1261 aa18.38■□□□□ 0.53
MBD1-227ENST00000592060 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
MBD1-227ENST00000592060 KIF23Q02241 960 aaPredicted RBP18.38■□□□□ 0.53
MBD1-227ENST00000592060 NTRK3Q16288 839 aa18.38■□□□□ 0.53
MBD1-227ENST00000592060 BRAPQ7Z569 592 aa18.38■□□□□ 0.53
MBD1-227ENST00000592060 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
MBD1-227ENST00000592060 FAM84BQ96KN1 310 aaPredicted RBP18.38■□□□□ 0.53
MBD1-227ENST00000592060 GJB4Q9NTQ9 266 aa18.38■□□□□ 0.53
MBD1-227ENST00000592060 RGS17Q9UGC6 210 aaPredicted RBP18.38■□□□□ 0.53
MBD1-227ENST00000592060 KIF28PB7ZC32 967 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 RXRAP19793 462 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 FBXO33Q7Z6M2 555 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 NBPF5PQ86XG9 351 aaPredicted RBP18.37■□□□□ 0.53
MBD1-227ENST00000592060 DUOX1Q9NRD9 1551 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 AP5Z1O43299 807 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 ZNF500O60304 480 aaPredicted RBP18.37■□□□□ 0.53
MBD1-227ENST00000592060 ZPR1O75312 459 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
MBD1-227ENST00000592060 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
MBD1-227ENST00000592060 CAVIN4Q5BKX8 364 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 FAM182BQ5T319 152 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 MYSM1Q5VVJ2 828 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 ENGASEQ8NFI3 743 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
MBD1-227ENST00000592060 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 ABCF2Q9UG63 623 aa18.37■□□□□ 0.53
MBD1-227ENST00000592060 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
MBD1-227ENST00000592060 BAZ2AQ9UIF9 1905 aaKnown RBP18.36■□□□□ 0.53
MBD1-227ENST00000592060 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
MBD1-227ENST00000592060 KIAA1551Q9HCM1 1747 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 MAGEB6P1A0A0J9YX57 407 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 GOLGA8AA7E2F4 631 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 IFIT3O14879 490 aaKnown RBP18.36■□□□□ 0.53
MBD1-227ENST00000592060 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 LINC00301Q8NCQ3 95 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 AIFM3Q96NN9 605 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 POLR3EQ9NVU0 708 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 LAMB1P07942 1786 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 STK36Q9NRP7 1315 aa18.36■□□□□ 0.53
MBD1-227ENST00000592060 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 SEMA3EO15041 775 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
MBD1-227ENST00000592060 YEATS4O95619 227 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 KLRK1P26718 216 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 ZNF384Q8TF68 577 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 ARHGEF1Q92888 912 aaKnown RBP18.35■□□□□ 0.53
MBD1-227ENST00000592060 ALG1Q9BT22 464 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 ANAPC4Q9UJX5 808 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 PPARAQ07869 468 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 ANO6Q4KMQ2 910 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 CPLX2Q6PUV4 134 aaKnown RBP18.35■□□□□ 0.53
MBD1-227ENST00000592060 CCDC73Q6ZRK6 1079 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 MYL10Q9BUA6 226 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 PCDHA7Q9UN72 937 aa18.35■□□□□ 0.53
MBD1-227ENST00000592060 A0A1W2PQ27 194 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms