RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 USP42Q9H9J4 1324 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 NRDCO43847 1150 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 SASH1O94885 1247 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 CDC25BP30305 580 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 MAGEA8P43361 318 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 NEXNQ0ZGT2 675 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 GPR161Q8N6U8 529 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 PEX19P40855 299 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 LINS1Q8NG48 757 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 XRN1Q8IZH2 1706 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 MAP2K7O14733 419 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 GIGYF1O75420 1035 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 CARD6Q9BX69 1037 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 TAF6LQ9Y6J9 622 aa13.97□□□□□ -0.17
SMARCA4-217ENST00000591595 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 MCM6Q14566 821 aa13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 FAM169AQ9Y6X4 670 aa13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 RPS6KB1P23443 525 aa13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 INPP5BP32019 993 aa13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 NDUFB9Q9Y6M9 179 aa13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 FAM208AQ9UK61 1670 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-217ENST00000591595 NALCNQ8IZF0 1738 aa13.96□□□□□ -0.18
SMARCA4-217ENST00000591595 PYGLP06737 847 aa13.96□□□□□ -0.18
SMARCA4-217ENST00000591595 IBSPP21815 317 aaPredicted RBP13.96□□□□□ -0.18
SMARCA4-217ENST00000591595 NPHP3Q7Z494 1330 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 JAK2O60674 1132 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 ZNF165P49910 485 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 ZNF589Q86UQ0 364 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 TDRD7Q8NHU6 1098 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 PPP1R13BQ96KQ4 1090 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 TSPAN18Q96SJ8 248 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 DDX19AQ9NUU7 478 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 PRPHP41219 470 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 LEO1Q8WVC0 666 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 LRRC2Q9BYS8 371 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 DNAJC25Q9H1X3 360 aa13.95□□□□□ -0.18
SMARCA4-217ENST00000591595 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■■■ 151.6
SMARCA4-217ENST00000591595 GOLGA6L19H0YKK7 550 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 N4BP1O75113 896 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 AMOTQ4VCS5 1084 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 C3orf20Q8ND61 904 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 PCDHGA4Q9Y5G9 962 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 PPFIA3O75145 1194 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 TUBB4AP04350 444 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 WLSQ5T9L3 541 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 RAB27AP51159 221 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 DIP2AQ14689 1571 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 LRRFIP1Q32MZ4 808 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 HOMER1Q86YM7 354 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 BRF1Q92994 677 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 MRFAP1L1Q96HT8 127 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 CAPN7Q9Y6W3 813 aa13.94□□□□□ -0.18
SMARCA4-217ENST00000591595 FMN2Q9NZ56 1722 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 NR1I2O75469 434 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 URI1O94763 535 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 KCNH5Q8NCM2 988 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 MAF1Q9H063 256 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 DNAI1Q9UI46 699 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 TOPAZ1Q8N9V7 1692 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 NEK1Q96PY6 1258 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 MYD88Q99836 296 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
SMARCA4-217ENST00000591595 EBAG9O00559 213 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 HSP90B2PQ58FF3 399 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 HHATQ5VTY9 493 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 KIRREL3Q8IZU9 778 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 RMI1Q9H9A7 625 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 HMG20BQ9P0W2 317 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 G3BP2Q9UN86 482 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 CCDC151A5D8V7 595 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 TOB2Q14106 344 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 CCDC129Q6ZRS4 1044 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 NCAPG2Q86XI2 1143 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 IRX2Q9BZI1 471 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 BECN2A8MW95 431 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 PHACTR2O75167 634 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 PDE6BP35913 854 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 KRT32Q14532 448 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 Q6ZUG5 572 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 SAAL1Q96ER3 474 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms