RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 TIMM10P62072 90 aa17.78■□□□□ 0.44
MBD1-220ENST00000589758 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
MBD1-220ENST00000589758 FBXO46Q6PJ61 603 aaPredicted RBP17.78■□□□□ 0.44
MBD1-220ENST00000589758 PDS5AQ29RF7 1337 aaKnown RBP17.77■□□□□ 0.44
MBD1-220ENST00000589758 ZBED9Q6R2W3 1325 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 A0A1B0GUL7 405 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 ADORA1P30542 326 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 TFCP2Q12800 502 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 MVPQ14764 893 aaKnown RBP17.77■□□□□ 0.44
MBD1-220ENST00000589758 DIXDC1Q155Q3 683 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 CDC42EP5Q6NZY7 148 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 SLF2Q8IX21 1173 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 WRNIP1Q96S55 665 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 PTPN18Q99952 460 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 ZNF341Q9BYN7 854 aa17.77■□□□□ 0.44
MBD1-220ENST00000589758 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
MBD1-220ENST00000589758 CRHR2Q13324 411 aa17.76■□□□□ 0.43
MBD1-220ENST00000589758 SPTY2D1Q68D10 685 aaPredicted RBP17.76■□□□□ 0.43
MBD1-220ENST00000589758 ERO1BQ86YB8 467 aa17.76■□□□□ 0.43
MBD1-220ENST00000589758 OTUD5Q96G74 571 aa17.76■□□□□ 0.43
MBD1-220ENST00000589758 XAGE2Q96GT9 111 aa17.76■□□□□ 0.43
MBD1-220ENST00000589758 ERO1AQ96HE7 468 aa17.76■□□□□ 0.43
MBD1-220ENST00000589758 CCL15-CCL14A0A0B4J2E2 113 aa17.75■□□□□ 0.43
MBD1-220ENST00000589758 G3BP1Q13283 466 aaKnown RBP eCLIP17.75■□□□□ 0.43
MBD1-220ENST00000589758 CCL15Q16663 113 aa17.75■□□□□ 0.43
MBD1-220ENST00000589758 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
MBD1-220ENST00000589758 USP40Q9NVE5 1235 aa17.75■□□□□ 0.43
MBD1-220ENST00000589758 TNNQ9UQP3 1299 aa17.75■□□□□ 0.43
MBD1-220ENST00000589758 WDHD1O75717 1129 aaPredicted RBP17.74■□□□□ 0.43
MBD1-220ENST00000589758 TCP10Q12799 353 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 RASGRF1Q13972 1273 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
MBD1-220ENST00000589758 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 ZFYVE28Q9HCC9 887 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 TRIM17Q9Y577 477 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 SNCAIPQ9Y6H5 919 aa17.74■□□□□ 0.43
MBD1-220ENST00000589758 PNMA6EA0A0J9YXQ4 647 aa17.73■□□□□ 0.43
MBD1-220ENST00000589758 CETPP11597 493 aa17.73■□□□□ 0.43
MBD1-220ENST00000589758 SOX10P56693 466 aa17.73■□□□□ 0.43
MBD1-220ENST00000589758 SP3Q02447 781 aa17.73■□□□□ 0.43
MBD1-220ENST00000589758 GORABQ5T7V8 394 aa17.73■□□□□ 0.43
MBD1-220ENST00000589758 MIGA2Q7L4E1 593 aa17.73■□□□□ 0.43
MBD1-220ENST00000589758 ZKSCAN4Q969J2 545 aaPredicted RBP17.73■□□□□ 0.43
MBD1-220ENST00000589758 ZCCHC17Q9NP64 241 aaKnown RBP17.73■□□□□ 0.43
MBD1-220ENST00000589758 GAKO14976 1311 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 NFIAQ12857 509 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 PPIL2Q13356 520 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 SNAPC2Q13487 334 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 ERICH6Q7L0X2 663 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 OTOP1Q7RTM1 612 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 FAM163AQ96GL9 167 aaPredicted RBP17.72■□□□□ 0.43
MBD1-220ENST00000589758 IDI2Q9BXS1 227 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 FAM198AQ9UFP1 575 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 ZNF112Q9UJU3 913 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 MYH2Q9UKX2 1941 aa17.72■□□□□ 0.43
MBD1-220ENST00000589758 AK9Q5TCS8 1911 aa17.71■□□□□ 0.43
MBD1-220ENST00000589758 IRF6O14896 467 aa17.71■□□□□ 0.43
MBD1-220ENST00000589758 ENTPD3O75355 529 aa17.71■□□□□ 0.43
MBD1-220ENST00000589758 PPATQ06203 517 aa17.71■□□□□ 0.43
MBD1-220ENST00000589758 ARHGEF6Q15052 776 aa17.71■□□□□ 0.43
MBD1-220ENST00000589758 TAF1CQ15572 869 aaPredicted RBP17.71■□□□□ 0.43
MBD1-220ENST00000589758 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
MBD1-220ENST00000589758 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
MBD1-220ENST00000589758 FAM43AQ8N2R8 423 aa17.7■□□□□ 0.42
MBD1-220ENST00000589758 CD99L2Q8TCZ2 262 aa17.7■□□□□ 0.42
MBD1-220ENST00000589758 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
MBD1-220ENST00000589758 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
MBD1-220ENST00000589758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.7■□□□□ 0.42
MBD1-220ENST00000589758 UQCRFS1P1P0C7P4 283 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 ARID4AP29374 1257 aaPredicted RBP17.69■□□□□ 0.42
MBD1-220ENST00000589758 INPP5BP32019 993 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 GSTO1P78417 241 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 POLA2Q14181 598 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 NOL9Q5SY16 702 aaKnown RBP17.69■□□□□ 0.42
MBD1-220ENST00000589758 SPATA5Q8NB90 893 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 GPR108Q9NPR9 543 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 PTPN22Q9Y2R2 807 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 MROH7-TTC4A0A0A0MT08 1334 aa17.69■□□□□ 0.42
MBD1-220ENST00000589758 LDHCP07864 332 aa17.68■□□□□ 0.42
MBD1-220ENST00000589758 RGS3P49796 1198 aa17.68■□□□□ 0.42
MBD1-220ENST00000589758 MECOMQ03112 1051 aa17.68■□□□□ 0.42
MBD1-220ENST00000589758 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
MBD1-220ENST00000589758 GPR75-ASB3A0A0A6YYF3 556 aa17.67■□□□□ 0.42
MBD1-220ENST00000589758 BTBD19C9JJ37 291 aa17.67■□□□□ 0.42
MBD1-220ENST00000589758 MAP4K4O95819 1239 aaPredicted RBP17.67■□□□□ 0.42
MBD1-220ENST00000589758 BTDP43251 543 aa17.67■□□□□ 0.42
MBD1-220ENST00000589758 OS9Q13438 667 aaPredicted RBP17.67■□□□□ 0.42
MBD1-220ENST00000589758 ITPRIPQ8IWB1 547 aa17.67■□□□□ 0.42
MBD1-220ENST00000589758 ZSCAN29Q8IWY8 852 aaPredicted RBP17.67■□□□□ 0.42
MBD1-220ENST00000589758 ZFPM1Q8IX07 1006 aa17.67■□□□□ 0.42
MBD1-220ENST00000589758 KCNH4Q9UQ05 1017 aa17.67■□□□□ 0.42
MBD1-220ENST00000589758 RFX7Q2KHR2 1363 aa17.66■□□□□ 0.42
MBD1-220ENST00000589758 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
MBD1-220ENST00000589758 TLR2O60603 784 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms