RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 KHNYNO15037 678 aaKnown RBP7.71□□□□□ -1.18
SMAD4-208ENST00000589706 HMGB1P09429 215 aaKnown RBP7.71□□□□□ -1.18
SMAD4-208ENST00000589706 XRCC5P13010 732 aaKnown RBP7.71□□□□□ -1.18
SMAD4-208ENST00000589706 ATF4P18848 351 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-208ENST00000589706 CTC1Q2NKJ3 1217 aa7.71□□□□□ -1.18
SMAD4-208ENST00000589706 MCF2L2Q86YR7 1114 aa7.71□□□□□ -1.18
SMAD4-208ENST00000589706 ANKRD24Q8TF21 1146 aa7.71□□□□□ -1.18
SMAD4-208ENST00000589706 GPRASP2Q96D09 838 aa7.71□□□□□ -1.18
SMAD4-208ENST00000589706 LIN7BQ9HAP6 207 aa7.71□□□□□ -1.18
SMAD4-208ENST00000589706 ZFATQ9P243 1243 aa7.71□□□□□ -1.18
SMAD4-208ENST00000589706 EIF2AK4Q9P2K8 1649 aaKnown RBP7.7□□□□□ -1.18
SMAD4-208ENST00000589706 MST1RQ04912 1400 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 TMEM238LA0A1B0GVL6 79 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 BAG6P46379 1132 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 C1QTNF8P60827 252 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 TNP2Q05952 138 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 PWP1Q13610 501 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 LAMC2Q13753 1193 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 CCDC85BQ15834 202 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-208ENST00000589706 RIPOR1Q6ZS17 1223 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 RELL1Q8IUW5 271 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 PNMA5Q96PV4 448 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.7□□□□□ -1.18
SMAD4-208ENST00000589706 HIRIP3Q9BW71 556 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-208ENST00000589706 OXCT2Q9BYC2 517 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-208ENST00000589706 ABCB6Q9NP58 842 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 PPM1HQ9ULR3 514 aa7.7□□□□□ -1.18
SMAD4-208ENST00000589706 DCCP43146 1447 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 BRWD3Q6RI45 1802 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 UNC13BO14795 1591 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 DCDC2BA2VCK2 349 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 STK10O94804 968 aaKnown RBP7.69□□□□□ -1.18
SMAD4-208ENST00000589706 PSAPP07602 524 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 THBS1P07996 1170 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 FGRP09769 529 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 SOGA3Q5TF21 947 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 GIMAP6Q6P9H5 292 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 DTHD1Q6ZMT9 781 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 PMFBP1Q8TBY8 1022 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 RASGRP4Q8TDF6 673 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 SPON2Q9BUD6 331 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 STRN4Q9NRL3 753 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 TLR7Q9NYK1 1049 aaKnown RBP7.69□□□□□ -1.18
SMAD4-208ENST00000589706 AKAP2Q9Y2D5 859 aa7.69□□□□□ -1.18
SMAD4-208ENST00000589706 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-208ENST00000589706 MAN1A2O60476 641 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 KIF4AO95239 1232 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
SMAD4-208ENST00000589706 HSP90B1P14625 803 aaKnown RBP7.68□□□□□ -1.18
SMAD4-208ENST00000589706 NFKB1P19838 968 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 GBP2P32456 591 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-208ENST00000589706 SOX18P35713 384 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 HYAL2Q12891 473 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
SMAD4-208ENST00000589706 CCDC144BQ3MJ40 725 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 SV2BQ7L1I2 683 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 NOP9Q86U38 636 aaKnown RBP7.68□□□□□ -1.18
SMAD4-208ENST00000589706 NCAPG2Q86XI2 1143 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 KIAA0825Q8IV33 1275 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 TCF12Q99081 682 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 OSMRQ99650 979 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 TRIM56Q9BRZ2 755 aaKnown RBP7.68□□□□□ -1.18
SMAD4-208ENST00000589706 NUCKS1Q9H1E3 243 aaKnown RBP7.68□□□□□ -1.18
SMAD4-208ENST00000589706 EFCC1Q9HA90 598 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 ZFYVE1Q9HBF4 777 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 MARK1Q9P0L2 795 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 ADAMTS1Q9UHI8 967 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 ZFYVE9O95405 1425 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 ADGRB3O60242 1522 aa7.68□□□□□ -1.18
SMAD4-208ENST00000589706 ARHGEF5Q12774 1597 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 MINDY4BA8MYZ0 360 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 H7C1W4 665 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 AXIN1O15169 862 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 DGAT1O75907 488 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 MAP3K6O95382 1288 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 RLBP1P12271 317 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 SPEM2Q0P670 501 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 COL13A1Q5TAT6 717 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-208ENST00000589706 CCNJLQ8IV13 435 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 TMEM74Q96NL1 305 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 CNTNAP3BQ96NU0 1288 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 ZKSCAN3Q9BRR0 538 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 CNTNAP3Q9BZ76 1288 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 PIK3R4Q99570 1358 aa7.67□□□□□ -1.18
SMAD4-208ENST00000589706 SLC35F4A4IF30 521 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 F6X3S4 739 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 BNIP3LO60238 219 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 FBXO24O75426 580 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 ACPPP15309 386 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 EIF4A3P38919 411 aaKnown RBP7.66□□□□□ -1.18
SMAD4-208ENST00000589706 PLAURQ03405 335 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 GRIN2CQ14957 1233 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 KRT27Q7Z3Y8 459 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 UNC5CLQ8IV45 518 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 SEC16BQ96JE7 1060 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 NDFIP2Q9NV92 336 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 SLC52A1Q9NWF4 448 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 ADAMTS13Q76LX8 1427 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 RIMS2Q9UQ26 1411 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms