RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 DNAJC2Q99543 621 aaKnown RBP30.38■■■□□ 2.45
CIRBP-223ENST00000589266 IQSEC3Q9UPP2 1182 aaPredicted RBP30.38■■■□□ 2.45
CIRBP-223ENST00000589266 COL1A1P02452 1464 aaPredicted RBP30.38■■■□□ 2.45
CIRBP-223ENST00000589266 HDAC9Q9UKV0 1011 aa30.37■■■□□ 2.45
CIRBP-223ENST00000589266 FKBP1AP62942 108 aaKnown RBP30.36■■■□□ 2.45
CIRBP-223ENST00000589266 RSBN1LQ6PCB5 846 aaPredicted RBP30.36■■■□□ 2.45
CIRBP-223ENST00000589266 SNRKQ9NRH2 765 aa30.36■■■□□ 2.45
CIRBP-223ENST00000589266 TRIM6-TRIM34B2RNG4 842 aa30.35■■■□□ 2.45
CIRBP-223ENST00000589266 CYP2E1P05181 493 aaPredicted RBP30.35■■■□□ 2.45
CIRBP-223ENST00000589266 STRIP1Q5VSL9 837 aa30.35■■■□□ 2.45
CIRBP-223ENST00000589266 PI16Q6UXB8 463 aa30.35■■■□□ 2.45
CIRBP-223ENST00000589266 PSME4Q14997 1843 aa30.34■■■□□ 2.45
CIRBP-223ENST00000589266 RFX7Q2KHR2 1363 aa30.34■■■□□ 2.45
CIRBP-223ENST00000589266 GOLIM4O00461 696 aa30.34■■■□□ 2.45
CIRBP-223ENST00000589266 SDSP20132 328 aa30.34■■■□□ 2.45
CIRBP-223ENST00000589266 TMED8Q6PL24 325 aaPredicted RBP30.34■■■□□ 2.45
CIRBP-223ENST00000589266 KBTBD3Q8NAB2 608 aa30.34■■■□□ 2.45
CIRBP-223ENST00000589266 PAPPA2Q9BXP8 1791 aa30.33■■■□□ 2.45
CIRBP-223ENST00000589266 USP17L3A6NCW0 530 aa30.33■■■□□ 2.45
CIRBP-223ENST00000589266 USP17L4A6NCW7 530 aa30.33■■■□□ 2.45
CIRBP-223ENST00000589266 LRRFIP1Q32MZ4 808 aaKnown RBP30.33■■■□□ 2.45
CIRBP-223ENST00000589266 TTLL5Q6EMB2 1281 aa30.33■■■□□ 2.45
CIRBP-223ENST00000589266 USP17L1Q7RTZ2 530 aa30.33■■■□□ 2.45
CIRBP-223ENST00000589266 ZNF296Q8WUU4 475 aaPredicted RBP30.33■■■□□ 2.45
CIRBP-223ENST00000589266 SUGT1Q9Y2Z0 365 aa30.33■■■□□ 2.45
CIRBP-223ENST00000589266 PITPNM2Q9BZ72 1349 aa30.32■■■□□ 2.44
CIRBP-223ENST00000589266 GTF2IP78347 998 aa30.32■■■□□ 2.44
CIRBP-223ENST00000589266 CHAF1AQ13111 956 aaPredicted RBP30.32■■■□□ 2.44
CIRBP-223ENST00000589266 SPTY2D1Q68D10 685 aaPredicted RBP30.32■■■□□ 2.44
CIRBP-223ENST00000589266 TBC1D8O95759 1140 aa30.31■■■□□ 2.44
CIRBP-223ENST00000589266 USP17L8P0C7I0 530 aa30.31■■■□□ 2.44
CIRBP-223ENST00000589266 MYOZ2Q9NPC6 264 aa30.31■■■□□ 2.44
CIRBP-223ENST00000589266 NDUFB9Q9Y6M9 179 aa30.31■■■□□ 2.44
CIRBP-223ENST00000589266 AK9Q5TCS8 1911 aa30.31■■■□□ 2.44
CIRBP-223ENST00000589266 DOCK2Q92608 1830 aa30.31■■■□□ 2.44
CIRBP-223ENST00000589266 MAP4K4O95819 1239 aaPredicted RBP30.3■■■□□ 2.44
CIRBP-223ENST00000589266 RILPL2Q969X0 211 aa30.3■■■□□ 2.44
CIRBP-223ENST00000589266 ANTXR1Q9H6X2 564 aa30.3■■■□□ 2.44
CIRBP-223ENST00000589266 MOB2Q70IA6 237 aa30.29■■■□□ 2.44
CIRBP-223ENST00000589266 EDC3Q96F86 508 aaKnown RBP30.29■■■□□ 2.44
CIRBP-223ENST00000589266 GMLQ99445 158 aa30.29■■■□□ 2.44
CIRBP-223ENST00000589266 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.29■■■□□ 2.443e-7■■■■□ 19.7
CIRBP-223ENST00000589266 PIH1D3Q9NQM4 214 aaKnown RBP30.29■■■□□ 2.44
CIRBP-223ENST00000589266 MYO3BQ8WXR4 1341 aa30.28■■■□□ 2.44
CIRBP-223ENST00000589266 UBE2Q2LH0YL09 131 aa30.28■■■□□ 2.44
CIRBP-223ENST00000589266 MAP3K12Q12852 859 aa30.28■■■□□ 2.44
CIRBP-223ENST00000589266 MFSD14BQ5SR56 506 aa30.28■■■□□ 2.44
CIRBP-223ENST00000589266 DACT2Q5SW24 774 aa30.28■■■□□ 2.44
CIRBP-223ENST00000589266 ZSCAN25Q6NSZ9 544 aa30.28■■■□□ 2.44
CIRBP-223ENST00000589266 FSD1Q9BTV5 496 aa30.28■■■□□ 2.44
CIRBP-223ENST00000589266 ZNF646O15015 1829 aaPredicted RBP30.28■■■□□ 2.44
CIRBP-223ENST00000589266 HIP1O00291 1037 aa30.27■■■□□ 2.44
CIRBP-223ENST00000589266 ZFYP08048 801 aaPredicted RBP30.27■■■□□ 2.44
CIRBP-223ENST00000589266 NOM1Q5C9Z4 860 aaKnown RBP30.27■■■□□ 2.44
CIRBP-223ENST00000589266 TBC1D9Q6ZT07 1266 aa30.27■■■□□ 2.44
CIRBP-223ENST00000589266 ERICH6Q7L0X2 663 aa30.27■■■□□ 2.44
CIRBP-223ENST00000589266 LRP2BPQ9P2M1 347 aa30.27■■■□□ 2.44
CIRBP-223ENST00000589266 ABCF2Q9UG63 623 aa30.27■■■□□ 2.44
CIRBP-223ENST00000589266 TM4SF4P48230 202 aa30.26■■■□□ 2.43
CIRBP-223ENST00000589266 GPR25O00155 361 aa30.25■■■□□ 2.43
CIRBP-223ENST00000589266 TTLL12Q14166 644 aaPredicted RBP30.25■■■□□ 2.43
CIRBP-223ENST00000589266 FBXO46Q6PJ61 603 aaPredicted RBP30.25■■■□□ 2.43
CIRBP-223ENST00000589266 SCAF8Q9UPN6 1271 aaKnown RBP30.25■■■□□ 2.43
CIRBP-223ENST00000589266 MYH7P12883 1935 aa30.24■■■□□ 2.43
CIRBP-223ENST00000589266 IDH1O75874 414 aaKnown RBP30.24■■■□□ 2.43
CIRBP-223ENST00000589266 LDHBP07195 334 aaKnown RBP30.24■■■□□ 2.43
CIRBP-223ENST00000589266 FBXW7Q969H0 707 aa30.24■■■□□ 2.43
CIRBP-223ENST00000589266 JAG2Q9Y219 1238 aa30.24■■■□□ 2.43
CIRBP-223ENST00000589266 CDC45O75419 566 aa30.23■■■□□ 2.43
CIRBP-223ENST00000589266 MMP14P50281 582 aa30.23■■■□□ 2.43
CIRBP-223ENST00000589266 PRAMEF18Q5VWM3 479 aa30.23■■■□□ 2.43
CIRBP-223ENST00000589266 MAST3O60307 1309 aa30.22■■■□□ 2.43
CIRBP-223ENST00000589266 UBE3CQ15386 1083 aa30.22■■■□□ 2.43
CIRBP-223ENST00000589266 CERS5Q8N5B7 392 aa30.22■■■□□ 2.43
CIRBP-223ENST00000589266 RAI14Q9P0K7 980 aa30.22■■■□□ 2.43
CIRBP-223ENST00000589266 MAST2Q6P0Q8 1798 aa30.22■■■□□ 2.43
CIRBP-223ENST00000589266 MYO5AQ9Y4I1 1855 aaKnown RBP30.21■■■□□ 2.43
CIRBP-223ENST00000589266 RNF113AO15541 343 aaKnown RBP30.21■■■□□ 2.43
CIRBP-223ENST00000589266 NF2P35240 595 aa30.21■■■□□ 2.43
CIRBP-223ENST00000589266 MRIQ9BWK5 157 aa30.21■■■□□ 2.43
CIRBP-223ENST00000589266 PRDX5P30044 214 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 ADD2P35612 726 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 GSTO1P78417 241 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 SREBF2Q12772 1141 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 NBPF9Q3BBW0 867 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 SLC9C2Q5TAH2 1124 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 CASC1Q6TDU7 716 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 SLF2Q8IX21 1173 aa30.2■■■□□ 2.43
CIRBP-223ENST00000589266 NSUN4Q96CB9 384 aaKnown RBP30.2■■■□□ 2.43
CIRBP-223ENST00000589266 PDE6AP16499 860 aa30.19■■■□□ 2.42
CIRBP-223ENST00000589266 CHMLP26374 656 aa30.19■■■□□ 2.42
CIRBP-223ENST00000589266 HDLBPQ00341 1268 aaKnown RBP30.19■■■□□ 2.42
CIRBP-223ENST00000589266 DZIP1Q86YF9 867 aaKnown RBP30.19■■■□□ 2.42
CIRBP-223ENST00000589266 FKTNO75072 461 aa30.18■■■□□ 2.42
CIRBP-223ENST00000589266 MECOMQ03112 1051 aa30.18■■■□□ 2.42
CIRBP-223ENST00000589266 MKRN3Q13064 507 aaKnown RBP30.18■■■□□ 2.42
CIRBP-223ENST00000589266 OGFOD1Q8N543 542 aa30.18■■■□□ 2.42
CIRBP-223ENST00000589266 DIAPH3Q9NSV4 1193 aa30.18■■■□□ 2.42
CIRBP-223ENST00000589266 LDHCP07864 332 aa30.17■■■□□ 2.42
CIRBP-223ENST00000589266 NAA16Q6N069 864 aaPredicted RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms