RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.72■■□□□ 1.39
CCDC130-209ENST00000588809 MCOLN1Q9GZU1 580 aa23.72■■□□□ 1.39
CCDC130-209ENST00000588809 GPR108Q9NPR9 543 aa23.72■■□□□ 1.39
CCDC130-209ENST00000588809 CDK5RAP2Q96SN8 1893 aa23.71■■□□□ 1.39
CCDC130-209ENST00000588809 GAKO14976 1311 aa23.71■■□□□ 1.39
CCDC130-209ENST00000588809 GJA5P36382 358 aa23.71■■□□□ 1.39
CCDC130-209ENST00000588809 HOOK2Q96ED9 719 aa23.71■■□□□ 1.39
CCDC130-209ENST00000588809 NEUROD6Q96NK8 337 aa23.71■■□□□ 1.39
CCDC130-209ENST00000588809 C1orf115Q9H7X2 142 aa23.71■■□□□ 1.39
CCDC130-209ENST00000588809 ALDH1A1P00352 501 aa23.7■■□□□ 1.38
CCDC130-209ENST00000588809 ARID4AP29374 1257 aaPredicted RBP23.7■■□□□ 1.38
CCDC130-209ENST00000588809 DGKZQ13574 1117 aa23.7■■□□□ 1.38
CCDC130-209ENST00000588809 FAM151AQ8WW52 585 aa23.7■■□□□ 1.38
CCDC130-209ENST00000588809 FAM163AQ96GL9 167 aaPredicted RBP23.7■■□□□ 1.38
CCDC130-209ENST00000588809 NOP58Q9Y2X3 529 aaKnown RBP23.7■■□□□ 1.38
CCDC130-209ENST00000588809 RFX7Q2KHR2 1363 aa23.69■■□□□ 1.38
CCDC130-209ENST00000588809 TBC1D8O95759 1140 aa23.69■■□□□ 1.38
CCDC130-209ENST00000588809 MAP3K9P80192 1104 aa23.69■■□□□ 1.38
CCDC130-209ENST00000588809 VGLL4Q14135 290 aa23.69■■□□□ 1.38
CCDC130-209ENST00000588809 SPTY2D1Q68D10 685 aaPredicted RBP23.69■■□□□ 1.38
CCDC130-209ENST00000588809 IFNL1Q8IU54 200 aa23.69■■□□□ 1.38
CCDC130-209ENST00000588809 HMG20BQ9P0W2 317 aa23.69■■□□□ 1.38
CCDC130-209ENST00000588809 FOCADQ5VW36 1801 aa23.68■■□□□ 1.38
CCDC130-209ENST00000588809 CENPFP49454 3210 aa23.68■■□□□ 1.38
CCDC130-209ENST00000588809 DZIP1Q86YF9 867 aaKnown RBP23.68■■□□□ 1.38
CCDC130-209ENST00000588809 PANK1Q8TE04 598 aa23.68■■□□□ 1.38
CCDC130-209ENST00000588809 OPTNQ96CV9 577 aa23.68■■□□□ 1.38
CCDC130-209ENST00000588809 ELP3Q9H9T3 547 aa23.68■■□□□ 1.38
CCDC130-209ENST00000588809 ABCF2Q9UG63 623 aa23.68■■□□□ 1.38
CCDC130-209ENST00000588809 TESPA1A2RU30 521 aaPredicted RBP23.67■■□□□ 1.38
CCDC130-209ENST00000588809 TNRC18O15417 2968 aaPredicted RBP23.67■■□□□ 1.38
CCDC130-209ENST00000588809 MS4A1P11836 297 aa23.67■■□□□ 1.38
CCDC130-209ENST00000588809 NFIAQ12857 509 aa23.67■■□□□ 1.38
CCDC130-209ENST00000588809 GORABQ5T7V8 394 aa23.67■■□□□ 1.38
CCDC130-209ENST00000588809 SLF2Q8IX21 1173 aa23.67■■□□□ 1.38
CCDC130-209ENST00000588809 SPATA5Q8NB90 893 aa23.67■■□□□ 1.38
CCDC130-209ENST00000588809 FAM198AQ9UFP1 575 aa23.67■■□□□ 1.38
CCDC130-209ENST00000588809 CSADQ9Y600 493 aa23.67■■□□□ 1.38
CCDC130-209ENST00000588809 IGF2BP3O00425 579 aaKnown RBP eCLIP23.66■■□□□ 1.38
CCDC130-209ENST00000588809 SURF6O75683 361 aaKnown RBP23.66■■□□□ 1.38
CCDC130-209ENST00000588809 TNNI3KQ59H18 835 aa23.66■■□□□ 1.38
CCDC130-209ENST00000588809 DCAF15Q66K64 600 aa23.66■■□□□ 1.38
CCDC130-209ENST00000588809 CEP85Q6P2H3 762 aa23.66■■□□□ 1.38
CCDC130-209ENST00000588809 ZNF296Q8WUU4 475 aaPredicted RBP23.66■■□□□ 1.38
CCDC130-209ENST00000588809 IDI2Q9BXS1 227 aa23.66■■□□□ 1.38
CCDC130-209ENST00000588809 USP40Q9NVE5 1235 aa23.66■■□□□ 1.38
CCDC130-209ENST00000588809 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.66■■□□□ 1.38
CCDC130-209ENST00000588809 FPGT-TNNI3KV9GXZ4 949 aa23.66■■□□□ 1.38
CCDC130-209ENST00000588809 GPR25O00155 361 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 UQCRFS1P1P0C7P4 283 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 MCAMP43121 646 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 PI16Q6UXB8 463 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 CTU1Q7Z7A3 348 aaKnown RBP23.65■■□□□ 1.38
CCDC130-209ENST00000588809 ZNF384Q8TF68 577 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 MS4A4AQ96JQ5 239 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 SNCAIPQ9Y6H5 919 aa23.65■■□□□ 1.38
CCDC130-209ENST00000588809 MROH7-TTC4A0A0A0MT08 1334 aa23.64■■□□□ 1.38
CCDC130-209ENST00000588809 SPDYE5A6NIY4 337 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 MECOMQ03112 1051 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 OS9Q13438 667 aaPredicted RBP23.64■■□□□ 1.37
CCDC130-209ENST00000588809 CNKSR2Q8WXI2 1034 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 WRNIP1Q96S55 665 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 R3HDMLQ9H3Y0 253 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 PTPRFP10586 1907 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 DOCK1Q14185 1865 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 ATRNL1Q5VV63 1379 aa23.64■■□□□ 1.37
CCDC130-209ENST00000588809 TCP10Q12799 353 aa23.63■■□□□ 1.37
CCDC130-209ENST00000588809 PTPN18Q99952 460 aa23.63■■□□□ 1.37
CCDC130-209ENST00000588809 ZNF341Q9BYN7 854 aa23.63■■□□□ 1.37
CCDC130-209ENST00000588809 PHIPQ8WWQ0 1821 aa23.63■■□□□ 1.37
CCDC130-209ENST00000588809 GPR75-ASB3A0A0A6YYF3 556 aa23.62■■□□□ 1.37
CCDC130-209ENST00000588809 ENTPD3O75355 529 aa23.62■■□□□ 1.37
CCDC130-209ENST00000588809 OTUD7BQ6GQQ9 843 aa23.62■■□□□ 1.37
CCDC130-209ENST00000588809 ERO1BQ86YB8 467 aa23.62■■□□□ 1.37
CCDC130-209ENST00000588809 ZKSCAN4Q969J2 545 aaPredicted RBP23.62■■□□□ 1.37
CCDC130-209ENST00000588809 NSUN4Q96CB9 384 aaKnown RBP23.62■■□□□ 1.37
CCDC130-209ENST00000588809 ZNF512BQ96KM6 892 aaPredicted RBP23.62■■□□□ 1.37
CCDC130-209ENST00000588809 DBNDD2Q9BQY9 259 aa23.62■■□□□ 1.37
CCDC130-209ENST00000588809 ZNF112Q9UJU3 913 aa23.62■■□□□ 1.37
CCDC130-209ENST00000588809 ATAD5Q96QE3 1844 aa23.61■■□□□ 1.37
CCDC130-209ENST00000588809 BTDP43251 543 aa23.61■■□□□ 1.37
CCDC130-209ENST00000588809 RGS3P49796 1198 aa23.61■■□□□ 1.37
CCDC130-209ENST00000588809 GTF2A2P52657 109 aa23.61■■□□□ 1.37
CCDC130-209ENST00000588809 OTUD5Q96G74 571 aa23.61■■□□□ 1.37
CCDC130-209ENST00000588809 RCAN3Q9UKA8 241 aa23.61■■□□□ 1.37
CCDC130-209ENST00000588809 FKTNO75072 461 aa23.6■■□□□ 1.37
CCDC130-209ENST00000588809 WDHD1O75717 1129 aaPredicted RBP23.6■■□□□ 1.37
CCDC130-209ENST00000588809 TBC1D9Q6ZT07 1266 aa23.6■■□□□ 1.37
CCDC130-209ENST00000588809 MIGA2Q7L4E1 593 aa23.6■■□□□ 1.37
CCDC130-209ENST00000588809 ZFPM1Q8IX07 1006 aa23.6■■□□□ 1.37
CCDC130-209ENST00000588809 DDX19BQ9UMR2 479 aa23.6■■□□□ 1.37
CCDC130-209ENST00000588809 CCDC85CA6NKD9 419 aa23.59■■□□□ 1.37
CCDC130-209ENST00000588809 NPM3O75607 178 aaKnown RBP23.59■■□□□ 1.37
CCDC130-209ENST00000588809 MAP4K4O95819 1239 aaPredicted RBP23.59■■□□□ 1.37
CCDC130-209ENST00000588809 RHBDL3P58872 404 aa23.59■■□□□ 1.37
CCDC130-209ENST00000588809 GSTO1P78417 241 aa23.59■■□□□ 1.37
CCDC130-209ENST00000588809 PKN2Q16513 984 aaKnown RBP23.59■■□□□ 1.37
CCDC130-209ENST00000588809 CCDC158Q5M9N0 1113 aa23.59■■□□□ 1.37
CCDC130-209ENST00000588809 BRI3BPQ8WY22 251 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms