RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 SHTN1A0MZ66 631 aa16.94■□□□□ 0.3
CCDC130-208ENST00000588071 ZNF280AP59817 542 aaPredicted RBP16.94■□□□□ 0.3
CCDC130-208ENST00000588071 PPP4CP60510 307 aa16.94■□□□□ 0.3
CCDC130-208ENST00000588071 LCORLQ8N3X6 602 aa16.94■□□□□ 0.3
CCDC130-208ENST00000588071 STRBPQ96SI9 672 aaKnown RBP16.94■□□□□ 0.3
CCDC130-208ENST00000588071 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
CCDC130-208ENST00000588071 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
CCDC130-208ENST00000588071 MYO1BO43795 1136 aa16.93■□□□□ 0.3
CCDC130-208ENST00000588071 REC8O95072 547 aa16.93■□□□□ 0.3
CCDC130-208ENST00000588071 APPP05067 770 aa16.93■□□□□ 0.3
CCDC130-208ENST00000588071 GNAT2P19087 354 aa16.93■□□□□ 0.3
CCDC130-208ENST00000588071 APOBEC3HQ6NTF7 200 aaKnown RBP16.93■□□□□ 0.3
CCDC130-208ENST00000588071 SAMD7Q7Z3H4 446 aa16.93■□□□□ 0.3
CCDC130-208ENST00000588071 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
CCDC130-208ENST00000588071 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
CCDC130-208ENST00000588071 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
CCDC130-208ENST00000588071 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
CCDC130-208ENST00000588071 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
CCDC130-208ENST00000588071 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
CCDC130-208ENST00000588071 EPS15P42566 896 aa16.92■□□□□ 0.3
CCDC130-208ENST00000588071 MTMR14Q8NCE2 650 aa16.92■□□□□ 0.3
CCDC130-208ENST00000588071 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
CCDC130-208ENST00000588071 CRNKL1Q9BZJ0 848 aaKnown RBP16.92■□□□□ 0.3
CCDC130-208ENST00000588071 IL25Q9H293 177 aa16.92■□□□□ 0.3
CCDC130-208ENST00000588071 ANO2Q9NQ90 1003 aa16.92■□□□□ 0.3
CCDC130-208ENST00000588071 SPDYE2BA6NHP3 402 aa16.91■□□□□ 0.3
CCDC130-208ENST00000588071 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
CCDC130-208ENST00000588071 SPDYE6P0CI01 402 aa16.91■□□□□ 0.3
CCDC130-208ENST00000588071 USP5P45974 858 aa16.91■□□□□ 0.3
CCDC130-208ENST00000588071 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
CCDC130-208ENST00000588071 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
CCDC130-208ENST00000588071 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
CCDC130-208ENST00000588071 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
CCDC130-208ENST00000588071 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
CCDC130-208ENST00000588071 HACL1Q9UJ83 578 aa16.91■□□□□ 0.3
CCDC130-208ENST00000588071 CDK5RAP2Q96SN8 1893 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 PRKAB2O43741 272 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 HSPD1P10809 573 aaKnown RBP16.9■□□□□ 0.3
CCDC130-208ENST00000588071 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 CDC42EP5Q6NZY7 148 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 ADARB2Q9NS39 739 aaKnown RBP16.9■□□□□ 0.3
CCDC130-208ENST00000588071 TMOD2Q9NZR1 351 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 SCN4AP35499 1836 aa16.9■□□□□ 0.3
CCDC130-208ENST00000588071 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 WNT10BO00744 389 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 SEC24BO95487 1268 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 RHBDL3P58872 404 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 NBPF9Q3BBW0 867 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
CCDC130-208ENST00000588071 BAZ2AQ9UIF9 1905 aaKnown RBP16.88■□□□□ 0.29
CCDC130-208ENST00000588071 POLR2AP24928 1970 aaKnown RBP16.88■□□□□ 0.29
CCDC130-208ENST00000588071 SRCAPQ6ZRS2 3230 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 CLRN2A0PK11 232 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 EPHX2P34913 555 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 PTH1RQ03431 593 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 IFNL3Q8IZI9 196 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 ZBED3Q96IU2 234 aaPredicted RBP16.88■□□□□ 0.29
CCDC130-208ENST00000588071 DSCC1Q9BVC3 393 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 LSG1Q9H089 658 aaKnown RBP16.88■□□□□ 0.29
CCDC130-208ENST00000588071 ATP8A2Q9NTI2 1148 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 ZNF70Q9UC06 446 aaPredicted RBP16.88■□□□□ 0.29
CCDC130-208ENST00000588071 MYH1P12882 1939 aa16.88■□□□□ 0.29
CCDC130-208ENST00000588071 RPAP1Q9BWH6 1393 aaPredicted RBP16.88■□□□□ 0.29
CCDC130-208ENST00000588071 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 GSG1L2A8MUP6 293 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 EGFRP00533 1210 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 TDO2P48775 406 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 PICALMQ13492 652 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 TRPM4Q8TD43 1214 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 NAPBQ9H115 298 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
CCDC130-208ENST00000588071 RRAGCQ9HB90 399 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 VEZTQ9HBM0 779 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
CCDC130-208ENST00000588071 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
CCDC130-208ENST00000588071 CACNB3P54284 484 aa16.86■□□□□ 0.29
CCDC130-208ENST00000588071 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
CCDC130-208ENST00000588071 USP50Q70EL3 339 aaPredicted RBP16.86■□□□□ 0.29
CCDC130-208ENST00000588071 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
CCDC130-208ENST00000588071 MAP4K1Q92918 833 aa16.86■□□□□ 0.29
CCDC130-208ENST00000588071 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
CCDC130-208ENST00000588071 TCP10L2B9ZVM9 353 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 WDHD1O75717 1129 aaPredicted RBP16.85■□□□□ 0.29
CCDC130-208ENST00000588071 FGAP02671 866 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
CCDC130-208ENST00000588071 TCP10Q12799 353 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 ALX1Q15699 326 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 GIMAP6Q6P9H5 292 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 AMOTL1Q8IY63 956 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
CCDC130-208ENST00000588071 IDI2Q9BXS1 227 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 DCP1AQ9NPI6 582 aaPredicted RBP16.85■□□□□ 0.29
CCDC130-208ENST00000588071 MCM9Q9NXL9 1143 aa16.85■□□□□ 0.29
CCDC130-208ENST00000588071 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
CCDC130-208ENST00000588071 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
CCDC130-208ENST00000588071 MINDY4BA8MYZ0 360 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms