RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SERPINB2P05120 415 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 DPEP1P16444 411 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 KCNA3P22001 575 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 CHMLP26374 656 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 CHRNA5P30532 468 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 PRR5LQ6MZQ0 368 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 RHPN1Q8TCX5 695 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 MYD88Q99836 296 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 CWC25Q9NXE8 425 aaPredicted RBP6.93□□□□□ -1.3
SDF2-206ENST00000587788 ZNF652Q9Y2D9 606 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 COL4A1P02462 1669 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 ADCY9O60503 1353 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 HIP1O00291 1037 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 ADH1BP00325 375 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 IGKV5-2P06315 115 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 NBPF7P0C2Y1 421 aaPredicted RBP6.92□□□□□ -1.3
SDF2-206ENST00000587788 COPS2P61201 443 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 OS9Q13438 667 aaPredicted RBP6.92□□□□□ -1.3
SDF2-206ENST00000587788 GPR162Q16538 588 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 TJAP1Q5JTD0 557 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 CNTROBQ8N137 903 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 CLASRPQ8N2M8 674 aaKnown RBP6.92□□□□□ -1.3
SDF2-206ENST00000587788 TNPO1Q92973 898 aaKnown RBP6.92□□□□□ -1.3
SDF2-206ENST00000587788 CCDC97Q96F63 343 aaPredicted RBP6.92□□□□□ -1.3
SDF2-206ENST00000587788 SPSB2Q99619 263 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 MTRQ99707 1265 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 ISCA1Q9BUE6 129 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 BCL11AQ9H165 835 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 MAP3K15Q6ZN16 1313 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 UBN2Q6ZU65 1347 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 ZC3H4Q9UPT8 1303 aaKnown RBP6.92□□□□□ -1.3
SDF2-206ENST00000587788 ABCC12Q96J65 1359 aa6.92□□□□□ -1.3
SDF2-206ENST00000587788 FAM177BA6PVY3 158 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 TLL1O43897 1013 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 GPTP24298 496 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 TGFB2P61812 414 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 CWF19L2Q2TBE0 894 aaKnown RBP6.91□□□□□ -1.3
SDF2-206ENST00000587788 PARP10Q53GL7 1025 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 TICAM2Q86XR7 235 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 ZBTB38Q8NAP3 1195 aaPredicted RBP6.91□□□□□ -1.3
SDF2-206ENST00000587788 RILPL2Q969X0 211 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 INTS4Q96HW7 963 aaKnown RBP6.91□□□□□ -1.3
SDF2-206ENST00000587788 ALG2Q9H553 416 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 PRDM9Q9NQV7 894 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 MAP10Q9P2G4 905 aa6.91□□□□□ -1.3
SDF2-206ENST00000587788 NIP7Q9Y221 180 aaKnown RBP eCLIP6.91□□□□□ -1.3
SDF2-206ENST00000587788 GOLGA6L3A6NEY3 463 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 ATP5J2-PTCD1G3V325 749 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 PCCAP05165 728 aaPredicted RBP6.9□□□□□ -1.3
SDF2-206ENST00000587788 IFIT2P09913 472 aaKnown RBP6.9□□□□□ -1.3
SDF2-206ENST00000587788 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.3
SDF2-206ENST00000587788 SOX11P35716 441 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 VAC14Q08AM6 782 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 G3BP1Q13283 466 aaKnown RBP eCLIP6.9□□□□□ -1.3
SDF2-206ENST00000587788 KIAA1211Q6ZU35 1233 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 ZNF34Q8IZ26 560 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 CNBD1Q8NA66 436 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 PI4K2BQ8TCG2 481 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
SDF2-206ENST00000587788 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 ECHDC1Q9NTX5 307 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 EVA1BQ9NVM1 165 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.3
SDF2-206ENST00000587788 LRRC37AA6NMS7 1700 aa6.9□□□□□ -1.31
SDF2-206ENST00000587788 A0A1B0GUL6 1792 aa6.9□□□□□ -1.31
SDF2-206ENST00000587788 FSD2A1L4K1 749 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 CD2BP2O95400 341 aaKnown RBP6.89□□□□□ -1.31
SDF2-206ENST00000587788 NTSR2O95665 410 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 HSPA4P34932 840 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 MRE11P49959 708 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 NEK4P51957 841 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 RABL6Q3YEC7 729 aaPredicted RBP6.89□□□□□ -1.31
SDF2-206ENST00000587788 SUSD4Q5VX71 490 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 SLC51AQ86UW1 340 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 NBPF5PQ86XG9 351 aaPredicted RBP6.89□□□□□ -1.31
SDF2-206ENST00000587788 C2CD5Q86YS7 1000 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 PNMA1Q8ND90 353 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 EVI5LQ96CN4 794 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 NUDT12Q9BQG2 462 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 PLA2G12BQ9BX93 195 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 IL21Q9HBE4 155 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 IL1RAPL2Q9NP60 686 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 BCS1LQ9Y276 419 aa6.89□□□□□ -1.31
SDF2-206ENST00000587788 RIC1Q4ADV7 1423 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 SGSM2O43147 1006 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 PDE8AO60658 829 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 CYP2E1P05181 493 aaPredicted RBP6.88□□□□□ -1.31
SDF2-206ENST00000587788 CSF1RP07333 972 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 YY1P25490 414 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 CASP7P55210 303 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 NR1H3Q13133 447 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 CUL4AQ13619 759 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 CCDC57Q2TAC2 916 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 ERFEQ4G0M1 354 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 SLC10A5Q5PT55 438 aa6.88□□□□□ -1.31
SDF2-206ENST00000587788 TPTE2Q6XPS3 522 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms