RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
CLPTM1-207ENST00000587537 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
CLPTM1-207ENST00000587537 SRCAPQ6ZRS2 3230 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 SCN4AP35499 1836 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 GOLGB1Q14789 3259 aaKnown RBP12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 IQCA1LA6NCM1 817 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 H7C1D1 291 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 MBD4O95243 580 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 FKBP1CQ5VVH2 108 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 ZNF384Q8TF68 577 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 RIOK1Q9BRS2 568 aaKnown RBP12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
CLPTM1-207ENST00000587537 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 M0R2C6 588 aa12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 BTDP43251 543 aa12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 ANAPC15P60006 121 aa12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 DIXDC1Q155Q3 683 aa12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 GJA3Q9Y6H8 435 aa12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 ZNF541Q9H0D2 1346 aa12.36□□□□□ -0.43
CLPTM1-207ENST00000587537 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 F8W031 263 aaPredicted RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 HSPD1P10809 573 aaKnown RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 PCP11498 1178 aaKnown RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 ZKSCAN1P17029 563 aaPredicted RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 TNFAIP1Q13829 316 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 ZNF589Q86UQ0 364 aaPredicted RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 MIGA1Q8NAN2 632 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 USP26Q9BXU7 913 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 LSG1Q9H089 658 aaKnown RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 MYOZ2Q9NPC6 264 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 GPRC5DQ9NZD1 345 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 CNOT7Q9UIV1 285 aaKnown RBP12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
CLPTM1-207ENST00000587537 APPP05067 770 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 USP5P45974 858 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 SCNN1DP51172 638 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 KRT32Q14532 448 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 GRIK5Q16478 980 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 TEX11Q8IYF3 940 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 ZBED3Q96IU2 234 aaPredicted RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 SEC62Q99442 399 aaKnown RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 MXD3Q9BW11 206 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 IDI2Q9BXS1 227 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 NAPBQ9H115 298 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 ARPP21Q9UBL0 812 aaPredicted RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 WDR90Q96KV7 1748 aa12.34□□□□□ -0.43
CLPTM1-207ENST00000587537 LAMA4Q16363 1823 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 ENTPD3O75355 529 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 TNNI2P48788 182 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 RBM25P49756 843 aaKnown RBP12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 RHBDL3P58872 404 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 TSGA10IPQ3SY00 556 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 SBK1Q52WX2 424 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 FAM83AQ86UY5 434 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 ZNF287Q9HBT7 754 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 CDK5RAP2Q96SN8 1893 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.44
CLPTM1-207ENST00000587537 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 HSPA4P34932 840 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 TDO2P48775 406 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 KIF4BQ2VIQ3 1234 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 PNMA8AQ86V59 439 aaPredicted RBP12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 HOOK2Q96ED9 719 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 IL17RAQ96F46 866 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 HACL1Q9UJ83 578 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 ANAPC4Q9UJX5 808 aa12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 RBM8AQ9Y5S9 174 aaKnown RBP12.32□□□□□ -0.44
CLPTM1-207ENST00000587537 LAMB1P07942 1786 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 WNT10BO00744 389 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms