RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PRKCZQ05513 592 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 PPATQ06203 517 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 UBE4AQ14139 1066 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 EPHA10Q5JZY3 1008 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 DCAF15Q66K64 600 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 ANKRD23Q86SG2 305 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 VPS37DQ86XT2 251 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 TEKT1Q969V4 418 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 FAM84BQ96KN1 310 aaPredicted RBP10.84□□□□□ -0.67
SDF2-204ENST00000587338 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
SDF2-204ENST00000587338 FRAT2O75474 233 aaPredicted RBP10.83□□□□□ -0.68
SDF2-204ENST00000587338 INPP5BP32019 993 aa10.83□□□□□ -0.68
SDF2-204ENST00000587338 FCGRTP55899 365 aa10.83□□□□□ -0.68
SDF2-204ENST00000587338 MIGA2Q7L4E1 593 aa10.83□□□□□ -0.68
SDF2-204ENST00000587338 SLAIN1Q8ND83 568 aa10.83□□□□□ -0.68
SDF2-204ENST00000587338 PARK7Q99497 189 aaKnown RBP10.83□□□□□ -0.68
SDF2-204ENST00000587338 ZNF341Q9BYN7 854 aa10.83□□□□□ -0.68
SDF2-204ENST00000587338 STAP2Q9UGK3 403 aa10.83□□□□□ -0.68
SDF2-204ENST00000587338 LAMA2P24043 3122 aaKnown RBP10.82□□□□□ -0.68
SDF2-204ENST00000587338 F6X3S4 739 aa10.82□□□□□ -0.68
SDF2-204ENST00000587338 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
SDF2-204ENST00000587338 HDLBPQ00341 1268 aaKnown RBP10.82□□□□□ -0.68
SDF2-204ENST00000587338 FAM83AQ86UY5 434 aa10.82□□□□□ -0.68
SDF2-204ENST00000587338 TBC1D22AQ8WUA7 517 aa10.82□□□□□ -0.68
SDF2-204ENST00000587338 GABRQQ9UN88 632 aa10.82□□□□□ -0.68
SDF2-204ENST00000587338 RPAP1Q9BWH6 1393 aaPredicted RBP10.81□□□□□ -0.68
SDF2-204ENST00000587338 ADCY3O60266 1144 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 SGPL1O95470 568 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 TFRCP02786 760 aaKnown RBP10.81□□□□□ -0.68
SDF2-204ENST00000587338 INHAP05111 366 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 CYP2C8P10632 490 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 ELNP15502 786 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 BEND3Q5T5X7 828 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 FKBP1CQ5VVH2 108 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 ZDHHC15Q96MV8 337 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 PUS3Q9BZE2 481 aaKnown RBP10.81□□□□□ -0.68
SDF2-204ENST00000587338 PRKRIP1Q9H875 184 aaPredicted RBP10.81□□□□□ -0.68
SDF2-204ENST00000587338 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
SDF2-204ENST00000587338 GRM8O00222 908 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 BCRP11274 1271 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 MOGSQ13724 837 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 CAVIN4Q5BKX8 364 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 APOBEC3HQ6NTF7 200 aaKnown RBP10.8□□□□□ -0.68
SDF2-204ENST00000587338 DEFB123Q8N688 67 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 DEFB118Q96PH6 123 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 MAST3O60307 1309 aa10.8□□□□□ -0.68
SDF2-204ENST00000587338 FLT3LGP49771 235 aa10.79□□□□□ -0.68
SDF2-204ENST00000587338 TCP10Q12799 353 aa10.79□□□□□ -0.68
SDF2-204ENST00000587338 Q7L0L9 218 aa10.79□□□□□ -0.68
SDF2-204ENST00000587338 FBXO33Q7Z6M2 555 aa10.79□□□□□ -0.68
SDF2-204ENST00000587338 C7orf61Q8IZ16 206 aa10.79□□□□□ -0.68
SDF2-204ENST00000587338 C9orf78Q9NZ63 289 aaPredicted RBP10.79□□□□□ -0.68
SDF2-204ENST00000587338 MROH5Q6ZUA9 1318 aa10.79□□□□□ -0.68
SDF2-204ENST00000587338 TNPO2O14787 897 aaKnown RBP10.78□□□□□ -0.68
SDF2-204ENST00000587338 BCAMP50895 628 aa10.78□□□□□ -0.68
SDF2-204ENST00000587338 METTL24Q5JXM2 366 aa10.78□□□□□ -0.68
SDF2-204ENST00000587338 NOL9Q5SY16 702 aaKnown RBP10.78□□□□□ -0.68
SDF2-204ENST00000587338 GPAT2Q6NUI2 795 aa10.78□□□□□ -0.68
SDF2-204ENST00000587338 DIS3LQ8TF46 1054 aaKnown RBP10.78□□□□□ -0.68
SDF2-204ENST00000587338 FAM151AQ8WW52 585 aa10.78□□□□□ -0.68
SDF2-204ENST00000587338 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
SDF2-204ENST00000587338 ZNF112Q9UJU3 913 aa10.78□□□□□ -0.68
SDF2-204ENST00000587338 ZMYND8Q9ULU4 1186 aaPredicted RBP10.78□□□□□ -0.68
SDF2-204ENST00000587338 FANCIQ9NVI1 1328 aa10.78□□□□□ -0.68
SDF2-204ENST00000587338 MGAMO43451 1857 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 CCER2I3L3R5 266 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 HHIPL2Q6UWX4 724 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 GADL1Q6ZQY3 521 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 NECAB2Q7Z6G3 386 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 WWC1Q8IX03 1113 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 SUCLG2Q96I99 432 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 GDF15Q99988 308 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 MRIQ9BWK5 157 aa10.77□□□□□ -0.69
SDF2-204ENST00000587338 PAK6Q9NQU5 681 aaPredicted RBP10.77□□□□□ -0.69
SDF2-204ENST00000587338 AK9Q5TCS8 1911 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 VCANP13611 3396 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 CXCL11O14625 94 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 NFIAQ12857 509 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 IRF5Q13568 498 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 CCDC27Q2M243 656 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 LRRC24Q50LG9 513 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 GPR153Q6NV75 609 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 SLC4A10Q6U841 1118 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 SMCR8Q8TEV9 937 aaPredicted RBP10.76□□□□□ -0.69
SDF2-204ENST00000587338 YTHDC1Q96MU7 727 aaKnown RBP10.76□□□□□ -0.69
SDF2-204ENST00000587338 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
SDF2-204ENST00000587338 STXBP5LQ9Y2K9 1186 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 SUGT1Q9Y2Z0 365 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 DAGLAQ9Y4D2 1042 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 CACNA1FO60840 1977 aa10.76□□□□□ -0.69
SDF2-204ENST00000587338 A0A0G2JLL6 359 aaPredicted RBP10.75□□□□□ -0.69
SDF2-204ENST00000587338 VAMP4O75379 141 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 PDE8BO95263 885 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 SYN1P17600 705 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms