RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 COL1A1P02452 1464 aaPredicted RBP9.75□□□□□ -0.85
VMP1-204ENST00000587259 MYO1BO43795 1136 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
VMP1-204ENST00000587259 SUPT20HL1Q3ZLR7 823 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 MFSD14BQ5SR56 506 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 ATF7IPQ6VMQ6 1270 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 LDHAL6AQ6ZMR3 332 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.75□□□□□ -0.85
VMP1-204ENST00000587259 C15orf52Q6ZUT6 534 aaKnown RBP9.75□□□□□ -0.85
VMP1-204ENST00000587259 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 FRAT1Q92837 279 aaPredicted RBP9.75□□□□□ -0.85
VMP1-204ENST00000587259 MS4A4AQ96JQ5 239 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 EFCC1Q9HA90 598 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 CNNM1Q9NRU3 951 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 DDX19BQ9UMR2 479 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 TTF2Q9UNY4 1162 aaKnown RBP9.75□□□□□ -0.85
VMP1-204ENST00000587259 PTCH2Q9Y6C5 1203 aa9.75□□□□□ -0.85
VMP1-204ENST00000587259 SP3Q02447 781 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 CHAF1AQ13111 956 aaPredicted RBP9.74□□□□□ -0.85
VMP1-204ENST00000587259 VGLL4Q14135 290 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 SLC4A10Q6U841 1118 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
VMP1-204ENST00000587259 ANKRD13AQ8IZ07 590 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 SH3TC2Q8TF17 1288 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 ERO1AQ96HE7 468 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 SUCLG2Q96I99 432 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 FAM84BQ96KN1 310 aaPredicted RBP9.74□□□□□ -0.85
VMP1-204ENST00000587259 PPP2R3BQ9Y5P8 575 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 ECM29Q5VYK3 1845 aa9.74□□□□□ -0.85
VMP1-204ENST00000587259 CCL15-CCL14A0A0B4J2E2 113 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 CRKP46108 304 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 INHBEP58166 350 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 MVPQ14764 893 aaKnown RBP9.73□□□□□ -0.85
VMP1-204ENST00000587259 TAF1CQ15572 869 aaPredicted RBP9.73□□□□□ -0.85
VMP1-204ENST00000587259 CCL15Q16663 113 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 CCDC57Q2TAC2 916 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 LRRC24Q50LG9 513 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 TDRD7Q8NHU6 1098 aaKnown RBP9.73□□□□□ -0.85
VMP1-204ENST00000587259 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 SPOCK2Q92563 424 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 CLUAP1Q96AJ1 413 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 ARMC5Q96C12 935 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 KAZALD1Q96I82 304 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 API5Q9BZZ5 524 aaKnown RBP9.73□□□□□ -0.85
VMP1-204ENST00000587259 PTPRCP08575 1304 aa9.73□□□□□ -0.85
VMP1-204ENST00000587259 TESPA1A2RU30 521 aaPredicted RBP9.72□□□□□ -0.85
VMP1-204ENST00000587259 GRM8O00222 908 aa9.72□□□□□ -0.85
VMP1-204ENST00000587259 HIBADHP31937 336 aaKnown RBP9.72□□□□□ -0.85
VMP1-204ENST00000587259 MMP14P50281 582 aa9.72□□□□□ -0.85
VMP1-204ENST00000587259 C20orf194Q5TEA3 1177 aa9.72□□□□□ -0.85
VMP1-204ENST00000587259 KLHDC4Q8TBB5 520 aa9.72□□□□□ -0.85
VMP1-204ENST00000587259 ZKSCAN4Q969J2 545 aaPredicted RBP9.72□□□□□ -0.85
VMP1-204ENST00000587259 ZNF333Q96JL9 665 aa9.72□□□□□ -0.85
VMP1-204ENST00000587259 CIZ1Q9ULV3 898 aaPredicted RBP9.72□□□□□ -0.85
VMP1-204ENST00000587259 FAM205AQ6ZU69 1335 aa9.72□□□□□ -0.85
VMP1-204ENST00000587259 LAMB1P07942 1786 aa9.71□□□□□ -0.85
VMP1-204ENST00000587259 NBPF7P0C2Y1 421 aaPredicted RBP9.71□□□□□ -0.86
VMP1-204ENST00000587259 CTGFP29279 349 aa9.71□□□□□ -0.86
VMP1-204ENST00000587259 FXR1P51114 621 aaKnown RBP eCLIP9.71□□□□□ -0.86
VMP1-204ENST00000587259 FKBP1AP62942 108 aaKnown RBP9.71□□□□□ -0.86
VMP1-204ENST00000587259 MAP3K9P80192 1104 aa9.71□□□□□ -0.86
VMP1-204ENST00000587259 SLC4A8Q2Y0W8 1093 aa9.71□□□□□ -0.86
VMP1-204ENST00000587259 SLC9C1Q4G0N8 1177 aa9.71□□□□□ -0.86
VMP1-204ENST00000587259 INTS3Q68E01 1043 aaKnown RBP9.71□□□□□ -0.86
VMP1-204ENST00000587259 OTUD7BQ6GQQ9 843 aa9.71□□□□□ -0.86
VMP1-204ENST00000587259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.71□□□□□ -0.86
VMP1-204ENST00000587259 C9orf78Q9NZ63 289 aaPredicted RBP9.71□□□□□ -0.86
VMP1-204ENST00000587259 SERPINA10Q9UK55 444 aa9.71□□□□□ -0.86
VMP1-204ENST00000587259 SNCAIPQ9Y6H5 919 aa9.71□□□□□ -0.86
VMP1-204ENST00000587259 BTBD19C9JJ37 291 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 TRIM27P14373 513 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 BCAMP50895 628 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 MAMSTRQ6ZN01 415 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 MIGA2Q7L4E1 593 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 WRNIP1Q96S55 665 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 BICC1Q9H694 974 aaKnown RBP9.7□□□□□ -0.86
VMP1-204ENST00000587259 ZFYVE28Q9HCC9 887 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
VMP1-204ENST00000587259 COG6Q9Y2V7 657 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 RIPOR2Q9Y4F9 1068 aa9.7□□□□□ -0.86
VMP1-204ENST00000587259 H0YGN5 161 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 IRF6O14896 467 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 INPP5BP32019 993 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 GTF2A2P52657 109 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 TNFAIP1Q13829 316 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 UBE4AQ14139 1066 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 MTFR1Q15390 333 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 MRPL50Q8N5N7 158 aaKnown RBP9.69□□□□□ -0.86
VMP1-204ENST00000587259 ANKRD44Q8N8A2 993 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 PANK1Q8TE04 598 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 ARAP2Q8WZ64 1704 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 GCC1Q96CN9 775 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 CPA4Q9UI42 421 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 CSADQ9Y600 493 aa9.69□□□□□ -0.86
VMP1-204ENST00000587259 RBBP6Q7Z6E9 1792 aaKnown RBP9.68□□□□□ -0.86
VMP1-204ENST00000587259 SPDYE5A6NIY4 337 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 FRAT2O75474 233 aaPredicted RBP9.68□□□□□ -0.86
VMP1-204ENST00000587259 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 LACTBP83111 547 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms