RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CERS5Q8N5B7 392 aa24.29■■□□□ 1.48
ATG4D-204ENST00000586417 JDP2Q8WYK2 163 aa24.29■■□□□ 1.48
ATG4D-204ENST00000586417 LARP6Q9BRS8 491 aaKnown RBP24.29■■□□□ 1.48
ATG4D-204ENST00000586417 PSME4Q14997 1843 aa24.28■■□□□ 1.48
ATG4D-204ENST00000586417 LARGE1O95461 756 aa24.28■■□□□ 1.48
ATG4D-204ENST00000586417 LMNB1P20700 586 aa24.28■■□□□ 1.48
ATG4D-204ENST00000586417 AIDAQ96BJ3 306 aa24.28■■□□□ 1.48
ATG4D-204ENST00000586417 E7EWF7 191 aa24.27■■□□□ 1.48
ATG4D-204ENST00000586417 DACT2Q5SW24 774 aa24.27■■□□□ 1.48
ATG4D-204ENST00000586417 TCEANC2Q96MN5 208 aa24.27■■□□□ 1.48
ATG4D-204ENST00000586417 SALL1Q9NSC2 1324 aa24.27■■□□□ 1.48
ATG4D-204ENST00000586417 USP17L3A6NCW0 530 aa24.26■■□□□ 1.47
ATG4D-204ENST00000586417 USP17L4A6NCW7 530 aa24.26■■□□□ 1.47
ATG4D-204ENST00000586417 MBD4O95243 580 aa24.26■■□□□ 1.47
ATG4D-204ENST00000586417 TOB2Q14106 344 aaPredicted RBP24.26■■□□□ 1.47
ATG4D-204ENST00000586417 STRIP1Q5VSL9 837 aa24.26■■□□□ 1.47
ATG4D-204ENST00000586417 USP17L1Q7RTZ2 530 aa24.26■■□□□ 1.47
ATG4D-204ENST00000586417 ZNF384Q8TF68 577 aa24.26■■□□□ 1.47
ATG4D-204ENST00000586417 RAI14Q9P0K7 980 aa24.26■■□□□ 1.47
ATG4D-204ENST00000586417 CXCL9Q07325 125 aa24.25■■□□□ 1.47
ATG4D-204ENST00000586417 IMMTQ16891 758 aaKnown RBP24.25■■□□□ 1.47
ATG4D-204ENST00000586417 ADGRA1Q86SQ6 560 aa24.25■■□□□ 1.47
ATG4D-204ENST00000586417 ZSCAN31Q96LW9 406 aaPredicted RBP24.25■■□□□ 1.47
ATG4D-204ENST00000586417 TPCN1Q9ULQ1 816 aa24.25■■□□□ 1.47
ATG4D-204ENST00000586417 PSMD14O00487 310 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 HMGB1P09429 215 aaKnown RBP24.24■■□□□ 1.47
ATG4D-204ENST00000586417 ANKRD1Q15327 319 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 TBC1D22AQ8WUA7 517 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 TNPO1Q92973 898 aaKnown RBP24.24■■□□□ 1.47
ATG4D-204ENST00000586417 ARMT1Q9H993 441 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 ZMYM6O95789 1325 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 GRIN3BO60391 1043 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 CYP7A1P22680 504 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 MECOMQ03112 1051 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 ALX1Q15699 326 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 LCORLQ8N3X6 602 aa24.24■■□□□ 1.47
ATG4D-204ENST00000586417 SH2B1Q9NRF2 756 aaPredicted RBP24.24■■□□□ 1.47
ATG4D-204ENST00000586417 MAST2Q6P0Q8 1798 aa24.23■■□□□ 1.47
ATG4D-204ENST00000586417 FZD9O00144 591 aa24.23■■□□□ 1.47
ATG4D-204ENST00000586417 LDHBP07195 334 aaKnown RBP24.23■■□□□ 1.47
ATG4D-204ENST00000586417 HAND2P61296 217 aa24.23■■□□□ 1.47
ATG4D-204ENST00000586417 ST3GAL1Q11201 340 aa24.23■■□□□ 1.47
ATG4D-204ENST00000586417 ME3Q16798 604 aa24.23■■□□□ 1.47
ATG4D-204ENST00000586417 EPB41L4AQ9HCS5 686 aaPredicted RBP24.23■■□□□ 1.47
ATG4D-204ENST00000586417 RNF181Q9P0P0 153 aa24.23■■□□□ 1.47
ATG4D-204ENST00000586417 PATL2C9JE40 543 aaKnown RBP24.22■■□□□ 1.47
ATG4D-204ENST00000586417 NUCB2P80303 420 aa24.22■■□□□ 1.47
ATG4D-204ENST00000586417 EXOSC10Q01780 885 aaKnown RBP24.22■■□□□ 1.47
ATG4D-204ENST00000586417 PKP1Q13835 747 aa24.22■■□□□ 1.47
ATG4D-204ENST00000586417 DHX32Q7L7V1 743 aaKnown RBP24.22■■□□□ 1.47
ATG4D-204ENST00000586417 NSUN4Q96CB9 384 aaKnown RBP24.22■■□□□ 1.47
ATG4D-204ENST00000586417 F8W031 263 aaPredicted RBP24.21■■□□□ 1.47
ATG4D-204ENST00000586417 VIL1P09327 827 aaKnown RBP24.21■■□□□ 1.47
ATG4D-204ENST00000586417 C9orf131Q5VYM1 1079 aa24.21■■□□□ 1.47
ATG4D-204ENST00000586417 SPTY2D1Q68D10 685 aaPredicted RBP24.21■■□□□ 1.47
ATG4D-204ENST00000586417 MIGA1Q8NAN2 632 aa24.21■■□□□ 1.47
ATG4D-204ENST00000586417 NBPF3Q9H094 633 aa24.21■■□□□ 1.47
ATG4D-204ENST00000586417 ZBTB12Q9Y330 459 aaPredicted RBP24.21■■□□□ 1.47
ATG4D-204ENST00000586417 GSG1L2A8MUP6 293 aa24.21■■□□□ 1.47
ATG4D-204ENST00000586417 ZNF541Q9H0D2 1346 aa24.21■■□□□ 1.47
ATG4D-204ENST00000586417 TIAM2Q8IVF5 1701 aa24.2■■□□□ 1.47
ATG4D-204ENST00000586417 ZNF213O14771 459 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 APPP05067 770 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 GNAT2P19087 354 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 DIXDC1Q155Q3 683 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 CIAPIN1Q6FI81 312 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 Q6ZUG5 572 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 IFNL3Q8IZI9 196 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 RIOK1Q9BRS2 568 aaKnown RBP24.2■■□□□ 1.46
ATG4D-204ENST00000586417 AGXT2Q9BYV1 514 aa24.2■■□□□ 1.46
ATG4D-204ENST00000586417 PRKAB2O43741 272 aa24.19■■□□□ 1.46
ATG4D-204ENST00000586417 NAA16Q6N069 864 aaPredicted RBP24.19■■□□□ 1.46
ATG4D-204ENST00000586417 DZIP1Q86YF9 867 aaKnown RBP24.19■■□□□ 1.46
ATG4D-204ENST00000586417 KIAA0825Q8IV33 1275 aa24.19■■□□□ 1.46
ATG4D-204ENST00000586417 ZDHHC9Q9Y397 364 aa24.19■■□□□ 1.46
ATG4D-204ENST00000586417 MYH2Q9UKX2 1941 aa24.19■■□□□ 1.46
ATG4D-204ENST00000586417 FKBP1AP62942 108 aaKnown RBP24.19■■□□□ 1.46
ATG4D-204ENST00000586417 RSBN1LQ6PCB5 846 aaPredicted RBP24.19■■□□□ 1.46
ATG4D-204ENST00000586417 CCDC83Q8IWF9 413 aa24.19■■□□□ 1.46
ATG4D-204ENST00000586417 MAGEB6P1A0A0J9YX57 407 aa24.18■■□□□ 1.46
ATG4D-204ENST00000586417 MCM4P33991 863 aa24.18■■□□□ 1.46
ATG4D-204ENST00000586417 ADAMTSL1Q8N6G6 1762 aa24.18■■□□□ 1.46
ATG4D-204ENST00000586417 LRRC2Q9BYS8 371 aa24.18■■□□□ 1.46
ATG4D-204ENST00000586417 TTF2Q9UNY4 1162 aaKnown RBP24.18■■□□□ 1.46
ATG4D-204ENST00000586417 SLC4A4Q9Y6R1 1079 aa24.18■■□□□ 1.46
ATG4D-204ENST00000586417 SCNN1DP51172 638 aa24.17■■□□□ 1.46
ATG4D-204ENST00000586417 EIF6P56537 245 aaKnown RBP24.17■■□□□ 1.46
ATG4D-204ENST00000586417 TBC1D10CQ8IV04 446 aa24.17■■□□□ 1.46
ATG4D-204ENST00000586417 MB21D2Q8IYB1 491 aaPredicted RBP24.17■■□□□ 1.46
ATG4D-204ENST00000586417 NECAB1Q8N987 351 aa24.17■■□□□ 1.46
ATG4D-204ENST00000586417 GMLQ99445 158 aa24.17■■□□□ 1.46
ATG4D-204ENST00000586417 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.17■■□□□ 1.46
ATG4D-204ENST00000586417 TMED8Q6PL24 325 aaPredicted RBP24.16■■□□□ 1.46
ATG4D-204ENST00000586417 CLEC17AQ6ZS10 378 aa24.16■■□□□ 1.46
ATG4D-204ENST00000586417 SUGT1Q9Y2Z0 365 aa24.16■■□□□ 1.46
ATG4D-204ENST00000586417 GJA3Q9Y6H8 435 aa24.16■■□□□ 1.46
ATG4D-204ENST00000586417 TNIP1Q15025 636 aa24.16■■□□□ 1.46
ATG4D-204ENST00000586417 FBXL16Q8N461 479 aa24.16■■□□□ 1.46
ATG4D-204ENST00000586417 NAPBQ9H115 298 aa24.16■■□□□ 1.46
ATG4D-204ENST00000586417 IGSF3O75054 1194 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms