RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 FAM153BP0C7A2 387 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 ATP11AP98196 1134 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 SPEM2Q0P670 501 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 LRRC14Q15048 493 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 MRPL14Q6P1L8 145 aaKnown RBP8.73□□□□□ -1.01
TPM4-203ENST00000586193 LLGL2Q6P1M3 1020 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 TTC6Q86TZ1 520 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 SULF2Q8IWU5 870 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 CCDC146Q8IYE0 955 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 C19orf47Q8N9M1 422 aaKnown RBP8.73□□□□□ -1.01
TPM4-203ENST00000586193 PBX4Q9BYU1 374 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 THRAP3Q9Y2W1 955 aaKnown RBP8.73□□□□□ -1.01
TPM4-203ENST00000586193 PCDHGC4Q9Y5F7 938 aa8.73□□□□□ -1.01
TPM4-203ENST00000586193 RPL6Q02878 288 aaKnown RBP8.72□□□□□ -1.01
TPM4-203ENST00000586193 MLLT1Q03111 559 aaPredicted RBP8.72□□□□□ -1.01
TPM4-203ENST00000586193 TNP2Q05952 138 aa8.72□□□□□ -1.01
TPM4-203ENST00000586193 PTPN11Q06124 597 aaPredicted RBP8.72□□□□□ -1.01
TPM4-203ENST00000586193 BRDTQ58F21 947 aaPredicted RBP8.72□□□□□ -1.01
TPM4-203ENST00000586193 FIGNL1Q6PIW4 674 aa8.72□□□□□ -1.01
TPM4-203ENST00000586193 HFE2Q6ZVN8 426 aa8.72□□□□□ -1.01
TPM4-203ENST00000586193 ZSWIM2Q8NEG5 633 aa8.72□□□□□ -1.01
TPM4-203ENST00000586193 GAL3ST3Q96A11 431 aa8.72□□□□□ -1.01
TPM4-203ENST00000586193 SLC30A3Q99726 388 aa8.72□□□□□ -1.01
TPM4-203ENST00000586193 CLEC4MQ9H2X3 399 aaPredicted RBP8.72□□□□□ -1.01
TPM4-203ENST00000586193 MAGEC2Q9UBF1 373 aaPredicted RBP8.72□□□□□ -1.01
TPM4-203ENST00000586193 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.02
TPM4-203ENST00000586193 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
TPM4-203ENST00000586193 MYCLP1P12525 358 aaPredicted RBP8.71□□□□□ -1.02
TPM4-203ENST00000586193 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.02
TPM4-203ENST00000586193 SIK1P57059 783 aa8.71□□□□□ -1.02
TPM4-203ENST00000586193 TBX4P57082 545 aa8.71□□□□□ -1.02
TPM4-203ENST00000586193 TM4SF20Q53R12 229 aa8.71□□□□□ -1.02
TPM4-203ENST00000586193 THNSL2Q86YJ6 484 aa8.71□□□□□ -1.02
TPM4-203ENST00000586193 RAVER1Q8IY67 606 aaKnown RBP8.71□□□□□ -1.02
TPM4-203ENST00000586193 CHAC2Q8WUX2 184 aa8.71□□□□□ -1.02
TPM4-203ENST00000586193 POP1Q99575 1024 aaKnown RBP8.71□□□□□ -1.02
TPM4-203ENST00000586193 EID1Q9Y6B2 187 aa8.71□□□□□ -1.02
TPM4-203ENST00000586193 UPK3BL1B0FP48 263 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 UPK3BL2E5RIL1 263 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 IRS4O14654 1257 aaPredicted RBP8.7□□□□□ -1.02
TPM4-203ENST00000586193 KCNQ2O43526 872 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 ATE1O95260 518 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 THBS1P07996 1170 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 ARNTP27540 789 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 NRLP54845 237 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 EXOSC10Q01780 885 aaKnown RBP8.7□□□□□ -1.02
TPM4-203ENST00000586193 PCDH1Q08174 1060 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 ZNF423Q2M1K9 1284 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 TMEM67Q5HYA8 995 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 MPRIPQ6WCQ1 1025 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 NIM1KQ8IY84 436 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 NINJ1Q92982 152 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 ZNF669Q96BR6 464 aaPredicted RBP8.7□□□□□ -1.02
TPM4-203ENST00000586193 MFSD3Q96ES6 412 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 CCDC136Q96JN2 1154 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 SPATA9Q9BWV2 254 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 TCEAL9Q9UHQ7 104 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
TPM4-203ENST00000586193 SOS2Q07890 1332 aaPredicted RBP8.7□□□□□ -1.02
TPM4-203ENST00000586193 ZBTB42B2RXF5 422 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 GUCY2CP25092 1073 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 LAMC2Q13753 1193 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
TPM4-203ENST00000586193 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.69□□□□□ -1.02
TPM4-203ENST00000586193 EEPD1Q7L9B9 569 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 DDX42Q86XP3 938 aaKnown RBP eCLIP8.69□□□□□ -1.02
TPM4-203ENST00000586193 ZSCAN1Q8NBB4 408 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 MORC4Q8TE76 937 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 BSNDQ8WZ55 320 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 EMILIN2Q9BXX0 1053 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
TPM4-203ENST00000586193 B3GALT4O96024 378 aa8.68□□□□□ -1.02
TPM4-203ENST00000586193 STAT3P40763 770 aa8.68□□□□□ -1.02
TPM4-203ENST00000586193 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
TPM4-203ENST00000586193 CBX2Q14781 532 aaPredicted RBP8.68□□□□□ -1.02
TPM4-203ENST00000586193 HGSNATQ68CP4 663 aa8.68□□□□□ -1.02
TPM4-203ENST00000586193 RIPOR1Q6ZS17 1223 aa8.68□□□□□ -1.02
TPM4-203ENST00000586193 CCAR1Q8IX12 1150 aaKnown RBP8.68□□□□□ -1.02
TPM4-203ENST00000586193 UBR7Q8N806 425 aa8.68□□□□□ -1.02
TPM4-203ENST00000586193 PMM1Q92871 262 aa8.68□□□□□ -1.02
TPM4-203ENST00000586193 RNF166Q96A37 237 aaPredicted RBP8.68□□□□□ -1.02
TPM4-203ENST00000586193 TM9SF2Q99805 663 aa8.68□□□□□ -1.02
TPM4-203ENST00000586193 A0A087X0B3 334 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 PRC1O43663 620 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 GHRHP01286 108 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 CDK8P49336 464 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 GPLD1P80108 840 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 NFKB2Q00653 900 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 SCARF1Q14162 830 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 CT47A1Q5JQC4 288 aaPredicted RBP8.67□□□□□ -1.02
TPM4-203ENST00000586193 CEP135Q66GS9 1140 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 VHLLQ6RSH7 139 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 TSR2Q969E8 191 aaKnown RBP8.67□□□□□ -1.02
TPM4-203ENST00000586193 IGFLR1Q9H665 355 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 CAAP1Q9H8G2 361 aa8.67□□□□□ -1.02
TPM4-203ENST00000586193 BNIP3LO60238 219 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 ADCY3O60266 1144 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 CD33P20138 364 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms