RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ASTN2O75129 1339 aaPredicted RBP15.22■□□□□ 0.03
VMP1-202ENST00000585847 PASKQ96RG2 1323 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 WNT10BO00744 389 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 FOXN1O15353 648 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 ZFYP08048 801 aaPredicted RBP15.22■□□□□ 0.03
VMP1-202ENST00000585847 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
VMP1-202ENST00000585847 SPTY2D1Q68D10 685 aaPredicted RBP15.22■□□□□ 0.03
VMP1-202ENST00000585847 APOBEC3HQ6NTF7 200 aaKnown RBP15.22■□□□□ 0.03
VMP1-202ENST00000585847 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
VMP1-202ENST00000585847 PRMT6Q96LA8 375 aaPredicted RBP15.22■□□□□ 0.03
VMP1-202ENST00000585847 RAI14Q9P0K7 980 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 LRP2BPQ9P2M1 347 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 SERPINA10Q9UK55 444 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 DAGLAQ9Y4D2 1042 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 CDK5RAP2Q96SN8 1893 aa15.22■□□□□ 0.03
VMP1-202ENST00000585847 H7C1D1 291 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
VMP1-202ENST00000585847 PDE6AP16499 860 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 LMOD1P29536 600 aaPredicted RBP15.21■□□□□ 0.03
VMP1-202ENST00000585847 ADD2P35612 726 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 CTCFP49711 727 aaPredicted RBP15.21■□□□□ 0.03
VMP1-202ENST00000585847 MMP14P50281 582 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 KIF4BQ2VIQ3 1234 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 NBPF9Q3BBW0 867 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 RBM26Q5T8P6 1007 aaKnown RBP15.21■□□□□ 0.03
VMP1-202ENST00000585847 HHIPL2Q6UWX4 724 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 ZDHHC15Q96MV8 337 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 DIAPH3Q9NSV4 1193 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 HDAC9Q9UKV0 1011 aa15.21■□□□□ 0.03
VMP1-202ENST00000585847 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 MAST3O60307 1309 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 CHMLP26374 656 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 RBM25P49756 843 aaKnown RBP15.2■□□□□ 0.02
VMP1-202ENST00000585847 VEGFBP49765 207 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 ZSCAN25Q6NSZ9 544 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
VMP1-202ENST00000585847 DZIP1Q86YF9 867 aaKnown RBP15.2■□□□□ 0.02
VMP1-202ENST00000585847 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 MAGEB6Q8N7X4 407 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 RILPL2Q969X0 211 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 TBC1D32Q96NH3 1257 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
VMP1-202ENST00000585847 GPR75-ASB3A0A0A6YYF3 556 aa15.19■□□□□ 0.02
VMP1-202ENST00000585847 MCCP23508 829 aa15.19■□□□□ 0.02
VMP1-202ENST00000585847 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
VMP1-202ENST00000585847 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
VMP1-202ENST00000585847 NAA16Q6N069 864 aaPredicted RBP15.19■□□□□ 0.02
VMP1-202ENST00000585847 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
VMP1-202ENST00000585847 PGAP2Q9UHJ9 254 aa15.19■□□□□ 0.02
VMP1-202ENST00000585847 ZNF532Q9HCE3 1301 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 FOCADQ5VW36 1801 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 ITGBL1O95965 494 aaPredicted RBP15.18■□□□□ 0.02
VMP1-202ENST00000585847 CYP7A1P22680 504 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 RHBDL3P58872 404 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 DLGAP5Q15398 846 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 MAP1SQ66K74 1059 aaPredicted RBP15.18■□□□□ 0.02
VMP1-202ENST00000585847 ESYT1Q9BSJ8 1104 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
VMP1-202ENST00000585847 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
VMP1-202ENST00000585847 ABT1Q9ULW3 272 aaKnown RBP15.18■□□□□ 0.02
VMP1-202ENST00000585847 BTDP43251 543 aa15.17■□□□□ 0.02
VMP1-202ENST00000585847 ANAPC15P60006 121 aa15.17■□□□□ 0.02
VMP1-202ENST00000585847 PPP4CP60510 307 aa15.17■□□□□ 0.02
VMP1-202ENST00000585847 DYNLL1P63167 89 aaKnown RBP15.17■□□□□ 0.02
VMP1-202ENST00000585847 UBE3CQ15386 1083 aa15.17■□□□□ 0.02
VMP1-202ENST00000585847 DEFB115Q30KQ5 88 aa15.17■□□□□ 0.02
VMP1-202ENST00000585847 CDC42EP5Q6NZY7 148 aa15.17■□□□□ 0.02
VMP1-202ENST00000585847 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
VMP1-202ENST00000585847 C22orf23Q9BZE7 217 aa15.17■□□□□ 0.02
VMP1-202ENST00000585847 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
VMP1-202ENST00000585847 RNF113AO15541 343 aaKnown RBP15.16■□□□□ 0.02
VMP1-202ENST00000585847 SGSM2O43147 1006 aa15.16■□□□□ 0.02
VMP1-202ENST00000585847 LDHCP07864 332 aa15.16■□□□□ 0.02
VMP1-202ENST00000585847 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
VMP1-202ENST00000585847 GSTO1P78417 241 aa15.16■□□□□ 0.02
VMP1-202ENST00000585847 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
VMP1-202ENST00000585847 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
VMP1-202ENST00000585847 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
VMP1-202ENST00000585847 SEC62Q99442 399 aaKnown RBP15.16■□□□□ 0.02
VMP1-202ENST00000585847 PUS7LQ9H0K6 701 aaKnown RBP15.16■□□□□ 0.02
VMP1-202ENST00000585847 ZNF70Q9UC06 446 aaPredicted RBP15.16■□□□□ 0.02
VMP1-202ENST00000585847 SCAF8Q9UPN6 1271 aaKnown RBP15.16■□□□□ 0.02
VMP1-202ENST00000585847 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
VMP1-202ENST00000585847 LBX1P52954 281 aa15.15■□□□□ 0.02
VMP1-202ENST00000585847 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
VMP1-202ENST00000585847 PAXIP1Q6ZW49 1069 aaPredicted RBP15.15■□□□□ 0.02
VMP1-202ENST00000585847 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
VMP1-202ENST00000585847 AATFQ9NY61 560 aaKnown RBP eCLIP15.15■□□□□ 0.02
VMP1-202ENST00000585847 GGA3Q9NZ52 723 aa15.15■□□□□ 0.02
VMP1-202ENST00000585847 RASSF10A6NK89 507 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 M0R2C6 588 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 WDHD1O75717 1129 aaPredicted RBP15.14■□□□□ 0.01
VMP1-202ENST00000585847 CACNB3P54284 484 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 MAP2K1Q02750 393 aaPredicted RBP15.14■□□□□ 0.01
VMP1-202ENST00000585847 NFIAQ12857 509 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 ANGEL2Q5VTE6 544 aaKnown RBP15.14■□□□□ 0.01
VMP1-202ENST00000585847 DLK2Q6UY11 383 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms