RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 GDAP1L1Q96MZ0 367 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 LLPHQ9BRT6 129 aaKnown RBP16.97■□□□□ 0.31
MBD1-212ENST00000585672 CLTCQ00610 1675 aaKnown RBP16.96■□□□□ 0.31
MBD1-212ENST00000585672 GOLGA6CA6NDK9 693 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 GOLGA6DP0CG33 693 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 MRPL12P52815 198 aaKnown RBP16.96■□□□□ 0.31
MBD1-212ENST00000585672 PIP4K2BP78356 416 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 IRX1P78414 480 aaPredicted RBP16.96■□□□□ 0.31
MBD1-212ENST00000585672 TBC1D8BQ0IIM8 1120 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 CRYMQ14894 314 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 SF3A1Q15459 793 aaKnown RBP16.96■□□□□ 0.31
MBD1-212ENST00000585672 WHAMMP3Q1A5X7 153 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 RAD9BQ6WBX8 426 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 LRRC2Q9BYS8 371 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 GOLGA6AQ9NYA3 693 aa16.96■□□□□ 0.31
MBD1-212ENST00000585672 RTN2O75298 545 aa16.96■□□□□ 0.3
MBD1-212ENST00000585672 IBSPP21815 317 aaPredicted RBP16.96■□□□□ 0.3
MBD1-212ENST00000585672 ZNF589Q86UQ0 364 aaPredicted RBP16.96■□□□□ 0.3
MBD1-212ENST00000585672 ARHGEF25Q86VW2 580 aa16.96■□□□□ 0.3
MBD1-212ENST00000585672 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.3
MBD1-212ENST00000585672 SLC35F6Q8N357 371 aa16.96■□□□□ 0.3
MBD1-212ENST00000585672 NEK1Q96PY6 1258 aa16.96■□□□□ 0.3
MBD1-212ENST00000585672 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.3
MBD1-212ENST00000585672 TUBE1Q9UJT0 475 aa16.96■□□□□ 0.3
MBD1-212ENST00000585672 GNGT1P63211 74 aa16.95■□□□□ 0.3
MBD1-212ENST00000585672 OS9Q13438 667 aaPredicted RBP16.95■□□□□ 0.3
MBD1-212ENST00000585672 STK38Q15208 465 aa16.95■□□□□ 0.3
MBD1-212ENST00000585672 OTUD6BQ8N6M0 293 aa16.95■□□□□ 0.3
MBD1-212ENST00000585672 TRIM6Q9C030 488 aaPredicted RBP16.95■□□□□ 0.3
MBD1-212ENST00000585672 ATXN2Q99700 1313 aaKnown RBP16.95■□□□□ 0.3
MBD1-212ENST00000585672 AKAP17AQ02040 695 aaKnown RBP16.95■□□□□ 0.3
MBD1-212ENST00000585672 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
MBD1-212ENST00000585672 NPATQ14207 1427 aa16.94■□□□□ 0.3
MBD1-212ENST00000585672 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
MBD1-212ENST00000585672 PFKFB1P16118 471 aa16.94■□□□□ 0.3
MBD1-212ENST00000585672 CCNHP51946 323 aaPredicted RBP16.94■□□□□ 0.3
MBD1-212ENST00000585672 SEMA3FQ13275 785 aa16.94■□□□□ 0.3
MBD1-212ENST00000585672 NCAPH2Q6IBW4 605 aa16.94■□□□□ 0.3
MBD1-212ENST00000585672 CALR3Q96L12 384 aaKnown RBP16.94■□□□□ 0.3
MBD1-212ENST00000585672 CDC5LQ99459 802 aaKnown RBP16.94■□□□□ 0.3
MBD1-212ENST00000585672 KLC4Q9NSK0 619 aa16.94■□□□□ 0.3
MBD1-212ENST00000585672 HIP1O00291 1037 aa16.94■□□□□ 0.3
MBD1-212ENST00000585672 NBPF7P0C2Y1 421 aaPredicted RBP16.94■□□□□ 0.3
MBD1-212ENST00000585672 ACTN3Q08043 901 aaPredicted RBP16.94■□□□□ 0.3
MBD1-212ENST00000585672 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 MEFVO15553 781 aaPredicted RBP16.93■□□□□ 0.3
MBD1-212ENST00000585672 FOXO3O43524 673 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 MYO1BO43795 1136 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 ABL1P00519 1130 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 KCNG4Q8TDN1 519 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 SPTLC2O15270 562 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 KIAA0754O94854 1291 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
MBD1-212ENST00000585672 CCDC148Q8NFR7 591 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 NAPGQ99747 312 aaPredicted RBP16.93■□□□□ 0.3
MBD1-212ENST00000585672 C19orf44Q9H6X5 657 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 SH3BP1Q9Y3L3 701 aa16.93■□□□□ 0.3
MBD1-212ENST00000585672 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 USP14P54578 494 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 PDE4BQ07343 736 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 GRIK3Q13003 919 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 KRT32Q14532 448 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 B4GALNT4Q76KP1 1039 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 AGLP35573 1532 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 FRMD3A2A2Y4 597 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 TAF5LO75529 589 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
MBD1-212ENST00000585672 PNOCQ13519 176 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 CRACR2AQ9BSW2 395 aa16.92■□□□□ 0.3
MBD1-212ENST00000585672 DDX20Q9UHI6 824 aaKnown RBP16.92■□□□□ 0.3
MBD1-212ENST00000585672 JCADQ9P266 1359 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 RASSF9O75901 435 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 NCOA5Q9HCD5 579 aaKnown RBP16.91■□□□□ 0.3
MBD1-212ENST00000585672 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 CMA1P23946 247 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 CDC27P30260 824 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 AMPHP49418 695 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 SMTNP53814 917 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 AMPD2Q01433 879 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 PANX2Q96RD6 677 aa16.91■□□□□ 0.3
MBD1-212ENST00000585672 TEX13AQ9BXU3 409 aaPredicted RBP16.91■□□□□ 0.3
MBD1-212ENST00000585672 SALL1Q9NSC2 1324 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 ANKRD33BA6NCL7 494 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 NDUFAB1O14561 156 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 ZMYND10O75800 440 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 POLR3DP05423 398 aaPredicted RBP16.9■□□□□ 0.3
MBD1-212ENST00000585672 CEP85LQ5SZL2 805 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 OLFM4Q6UX06 510 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 RASGRP2Q7LDG7 609 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 GSPT2Q8IYD1 628 aaKnown RBP16.9■□□□□ 0.3
MBD1-212ENST00000585672 KIRREL3Q8IZU9 778 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 ZNF483Q8TF39 744 aaPredicted RBP16.9■□□□□ 0.3
MBD1-212ENST00000585672 MYO6Q9UM54 1294 aa16.9■□□□□ 0.3
MBD1-212ENST00000585672 AKR1B15C9JRZ8 316 aaPredicted RBP16.9■□□□□ 0.3
MBD1-212ENST00000585672 YEATS4O95619 227 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms