RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-215ENST00000584944 CA12O43570 354 aa16.8■□□□□ 0.28
TRAF4-215ENST00000584944 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-215ENST00000584944 HUNKP57058 714 aa16.8■□□□□ 0.28
TRAF4-215ENST00000584944 ZSCAN25Q6NSZ9 544 aa16.8■□□□□ 0.28
TRAF4-215ENST00000584944 OTUD7AQ8TE49 926 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-215ENST00000584944 NDUFB9Q9Y6M9 179 aa16.8■□□□□ 0.28
TRAF4-215ENST00000584944 PSME4Q14997 1843 aa16.8■□□□□ 0.28
TRAF4-215ENST00000584944 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
TRAF4-215ENST00000584944 ADM5C9JUS6 153 aa16.79■□□□□ 0.28
TRAF4-215ENST00000584944 IGSF3O75054 1194 aa16.79■□□□□ 0.28
TRAF4-215ENST00000584944 PDE1AP54750 535 aa16.79■□□□□ 0.28
TRAF4-215ENST00000584944 MECOMQ03112 1051 aa16.79■□□□□ 0.28
TRAF4-215ENST00000584944 SULF1Q8IWU6 871 aa16.79■□□□□ 0.28
TRAF4-215ENST00000584944 ZIC5Q96T25 663 aa16.79■□□□□ 0.28
TRAF4-215ENST00000584944 BAG3O95817 575 aa16.78■□□□□ 0.28
TRAF4-215ENST00000584944 NOGQ13253 232 aa16.78■□□□□ 0.28
TRAF4-215ENST00000584944 DIXDC1Q155Q3 683 aa16.78■□□□□ 0.28
TRAF4-215ENST00000584944 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
TRAF4-215ENST00000584944 MRIQ9BWK5 157 aa16.78■□□□□ 0.28
TRAF4-215ENST00000584944 VEZTQ9HBM0 779 aa16.78■□□□□ 0.28
TRAF4-215ENST00000584944 GBA2Q9HCG7 927 aaPredicted RBP16.78■□□□□ 0.28
TRAF4-215ENST00000584944 PIH1D3Q9NQM4 214 aaKnown RBP16.78■□□□□ 0.28
TRAF4-215ENST00000584944 AOX1Q06278 1338 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.28
TRAF4-215ENST00000584944 SPDYE6P0CI01 402 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 TNFAIP1Q13829 316 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 GRIK5Q16478 980 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 ANGEL2Q5VTE6 544 aaKnown RBP16.77■□□□□ 0.28
TRAF4-215ENST00000584944 TMED8Q6PL24 325 aaPredicted RBP16.77■□□□□ 0.28
TRAF4-215ENST00000584944 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 C2orf69Q8N8R5 385 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 ZDHHC15Q96MV8 337 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 FSD1Q9BTV5 496 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 GGA3Q9NZ52 723 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 STAP2Q9UGK3 403 aa16.77■□□□□ 0.28
TRAF4-215ENST00000584944 ASTN2O75129 1339 aaPredicted RBP16.76■□□□□ 0.27
TRAF4-215ENST00000584944 FAM155AB1AL88 458 aaPredicted RBP16.76■□□□□ 0.27
TRAF4-215ENST00000584944 WNT10BO00744 389 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 PLCG2P16885 1265 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 CYP7A1P22680 504 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 TNNI2P48788 182 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 NBPF9Q3BBW0 867 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 RGMBQ6NW40 437 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
TRAF4-215ENST00000584944 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 ANTXR1Q9H6X2 564 aa16.76■□□□□ 0.27
TRAF4-215ENST00000584944 MROH7-TTC4A0A0A0MT08 1334 aa16.75■□□□□ 0.27
TRAF4-215ENST00000584944 CLRN2A0PK11 232 aa16.75■□□□□ 0.27
TRAF4-215ENST00000584944 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
TRAF4-215ENST00000584944 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
TRAF4-215ENST00000584944 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
TRAF4-215ENST00000584944 NSUN4Q96CB9 384 aaKnown RBP16.75■□□□□ 0.27
TRAF4-215ENST00000584944 DAGLAQ9Y4D2 1042 aa16.75■□□□□ 0.27
TRAF4-215ENST00000584944 BTDP43251 543 aa16.74■□□□□ 0.27
TRAF4-215ENST00000584944 PI4K2BQ8TCG2 481 aa16.74■□□□□ 0.27
TRAF4-215ENST00000584944 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
TRAF4-215ENST00000584944 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
TRAF4-215ENST00000584944 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
TRAF4-215ENST00000584944 PRMT6Q96LA8 375 aaPredicted RBP16.74■□□□□ 0.27
TRAF4-215ENST00000584944 TDRD3Q9H7E2 651 aaKnown RBP16.74■□□□□ 0.27
TRAF4-215ENST00000584944 USP40Q9NVE5 1235 aa16.74■□□□□ 0.27
TRAF4-215ENST00000584944 ZFYP08048 801 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-215ENST00000584944 NF2P35240 595 aa16.73■□□□□ 0.27
TRAF4-215ENST00000584944 KBTBD3Q8NAB2 608 aa16.73■□□□□ 0.27
TRAF4-215ENST00000584944 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
TRAF4-215ENST00000584944 PDE6AP16499 860 aa16.72■□□□□ 0.27
TRAF4-215ENST00000584944 RGS3P49796 1198 aa16.72■□□□□ 0.27
TRAF4-215ENST00000584944 ZNF157P51786 506 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-215ENST00000584944 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
TRAF4-215ENST00000584944 MCOLN1Q9GZU1 580 aa16.72■□□□□ 0.27
TRAF4-215ENST00000584944 AATFQ9NY61 560 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRAF4-215ENST00000584944 ZNF70Q9UC06 446 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-215ENST00000584944 ZNF532Q9HCE3 1301 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 KIF23Q02241 960 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-215ENST00000584944 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 APOBEC3HQ6NTF7 200 aaKnown RBP16.71■□□□□ 0.27
TRAF4-215ENST00000584944 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 FAM163AQ96GL9 167 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-215ENST00000584944 DDRGK1Q96HY6 314 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 OSBPL3Q9H4L5 887 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
TRAF4-215ENST00000584944 GAKO14976 1311 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 RNF113AO15541 343 aaKnown RBP16.7■□□□□ 0.26
TRAF4-215ENST00000584944 SLC10A3P09131 477 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 RGS19P49795 217 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 CDC42EP5Q6NZY7 148 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-215ENST00000584944 TEX11Q8IYF3 940 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 SAGE1Q9NXZ1 904 aa16.7■□□□□ 0.26
TRAF4-215ENST00000584944 HIP1O00291 1037 aa16.69■□□□□ 0.26
TRAF4-215ENST00000584944 PDE4AP27815 886 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms